PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG040760.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 233aa MW: 25710.1 Da PI: 7.7058 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.8 | 1.6e-15 | 23 | 69 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 + WT+eEd+ll + v++ Gg+ +W++I r ++ gR k+c++rw ++l TRIDC4BG040760.1 23 KMWTKEEDDLLREQVRRCGGPhNWDSICRGLP-GRNSKSCRLRWCQHL 69 67******************************.***********9986 PP | |||||||
2 | Myb_DNA-binding | 43.7 | 6.2e-14 | 78 | 120 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T +Ed l+v++ + +G++ W+tIa + gRt++ +k+rw+++ TRIDC4BG040760.1 78 PFTIQEDMLIVKYQATYGNR-WSTIADFLS-GRTDNAVKNRWNSV 120 8999****************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MMPTSGNDAG ACDGDGSPHG VKKMWTKEED DLLREQVRRC GGPHNWDSIC RGLPGRNSKS 60 CRLRWCQHLD PRVEAVKPFT IQEDMLIVKY QATYGNRWST IADFLSGRTD NAVKNRWNSV 120 LRKRQEHAPS QQGQTRPWAP SAARQAAGPE VTPRCLPLFP GSAEEVSEAD TSAAARKCLD 180 LFPLAPGDIR ADVDAAAPPS DMACGAGDPL TELRLWPAPR VVFDVMPLQA YRM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 9e-35 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG040760.1 |