PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG038940.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 538aa MW: 58513.1 Da PI: 7.3765

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG038940.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.2	1.7e-20	38	125	6	90
FAR1 6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 YA++ F r++ + ++ +++ ++ + vCskeg+re + kk + k++r+r+ tr+gCka+++vkk+++gkw+v+k+e+eHnH+l TRIDC4BG038940.2 38 YAQRRDFMKRVTVKAST-LTKNSKSGQIVCSKEGFREVRAKKeitdEGKTKRPRMITRVGCKAMIVVKKMNSGKWMVSKFEKEHNHSLL 125 99999999888876666.6667899***********99999998899999********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MLQGNFTACM QDMQVFEFGL AGIPAPDVII QSFLVVLYAQ RRDFMKRVTV KASTLTKNSK 60 SGQIVCSKEG FREVRAKKEI TDEGKTKRPR MITRVGCKAM IVVKKMNSGK WMVSKFEKEH 120 NHSLLSSKQA PSTSNITSGE NAESAAKSSD PDEAKVEEYS AGIQCNSTDS LTVLYNKLCQ 180 EAIKFAKEGS VTEEIYHVAM SALKEAAEKV AQVKSCHPIM PHRGVSGSES KHKVVQMKTM 240 SASQCSDVAK QKTIPSQLTM FQESTSKLMF IPTNLLTDSG LANSDNNHPS SCAFTSSGRQ 300 GRHGSECSYL HAENRKEGCP EKYQNSTSSR ATQGNHSTYH GHSEETTVAI PAIPLTLYMP 360 LSRNSPGASA DGQYKLLAAP IEAVPISYRP AEPIRQPKRS FCNLGPLPGV MSELTRREKG 420 PHPLVHATAL ACGARVVPVE EAASLIKAIE SKIRSGGAKI ARLPSSRLTR LVPEAVSMSS 480 SSEDGEENDH SEPPAVNVEG YCHDDQISEE MKLQGEASEL ETDSENCSGH ENHDTADC

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MLQGNFTACM QDMQVFEFGL AGIPAPDVII QSFLVVLYAQ RRDFMKRVTV KASTLTKNSK  60
SGQIVCSKEG FREVRAKKEI TDEGKTKRPR MITRVGCKAM IVVKKMNSGK WMVSKFEKEH  120
NHSLLSSKQA PSTSNITSGE NAESAAKSSD PDEAKVEEYS AGIQCNSTDS LTVLYNKLCQ  180
EAIKFAKEGS VTEEIYHVAM SALKEAAEKV AQVKSCHPIM PHRGVSGSES KHKVVQMKTM  240
SASQCSDVAK QKTIPSQLTM FQESTSKLMF IPTNLLTDSG LANSDNNHPS SCAFTSSGRQ  300
GRHGSECSYL HAENRKEGCP EKYQNSTSSR ATQGNHSTYH GHSEETTVAI PAIPLTLYMP  360
LSRNSPGASA DGQYKLLAAP IEAVPISYRP AEPIRQPKRS FCNLGPLPGV MSELTRREKG  420
PHPLVHATAL ACGARVVPVE EAASLIKAIE SKIRSGGAKI ARLPSSRLTR LVPEAVSMSS  480
SSEDGEENDH SEPPAVNVEG YCHDDQISEE MKLQGEASEL ETDSENCSGH ENHDTADC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	2e-17	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG038940.2