PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG034270.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 318aa MW: 35292.3 Da PI: 4.5677 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.3 | 1.7e-18 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd llv++++ +G g+W++ ar g++Rt+k+c++rw++yl TRIDC4BG034270.1 22 RGPWTVEEDILLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 69 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.3 | 2.6e-16 | 75 | 118 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC4BG034270.1 75 RGSITPQEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 118 7889******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence |
MDMAHERDSS SEEEVMAGDL RRGPWTVEED ILLVNYIAAH GEGRWNSLAR SAGLKRTGKS 60 CRLRWLNYLR PDLRRGSITP QEQLLILELH SRWGNRWSKI AQHLPGRTDN EIKNYWRTRV 120 QKHAKQLKCD VNSQQFKDVM RYLWMPRLVE RIQAEAVQTA ADTPLSWQHG ADDALYESPE 180 LPVDACWPAE YAAVAGGQLP NASVAELSST TTAGSSSPST TDSGAGAQPS WPAAVDGAEW 240 FTTACDASSA AATMCDTDQL IQQQQQQAPS QLAGAWTSEP LPSLGFPELG VADFEIGSLD 300 VDSIWSMDDL WYTQPQFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 2e-84 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG034270.1 |