PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG033620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 247aa MW: 27245.2 Da PI: 9.3395 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 26.6 | 1.6e-08 | 13 | 78 | 1 | 64 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykki 64 rW++ e+ aL++a ++ r +r++l++ +W v +++ +++ ++r+ qC+ ++ l+++yk + TRIDC4BG033620.1 13 RWSDGETSALLDAWGQIYLRRNRSSLRMDDWLTVCRAVnaHRGDLNRTLAQCRTRLCTLKQKYKVE 78 8*************************************8888899******************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MTSRKTGPGA GGRWSDGETS ALLDAWGQIY LRRNRSSLRM DDWLTVCRAV NAHRGDLNRT 60 LAQCRTRLCT LKQKYKVEVA KGLPALGSPH LARLRGFLAD SKFSNGPPPG FDGKTPAAAV 120 KMEEEEEEEG EEEASGCVGG SAGRSEVPVK RQRHFSSLRD ILERSGDPSL AKTPATVCCG 180 CELVGGSATG VTKLVAEIRK VAEVHERVEM ERHKFKKEMQ MLKMMELKDV RLEHKKVKEN 240 PKEADGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G14180.1 | 2e-11 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG033620.1 |