PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT3G14180.1
Common NameASIL2, MAG2.16
Organism
Arabidopsis thaliana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family Trihelix
Protein Properties Length: 443aa    MW: 48314.1 Da    PI: 10.2708
Description sequence-specific DNA binding transcription factors
Gene Model
Gene Model ID Type Source Coding Sequence
AT3G14180.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.93.6e-1583170186
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  +W++  + +Li+a  e+  +l+rg+lk+++W+ev++ +      +++ ++ +qCk++++ ++k+yk++k +  ++  + +s++++fd+l+
  AT3G14180.1  83 CWSEAATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVssreDYGKIPKTDIQCKNRIDTVKKKYKQEKVRIANG--GGRSRWVFFDKLD 170
                  7*************************************8766667789999*******************99997..56668******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.6E-2581172No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0010431Biological Processseed maturation
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000013anatomycauline leaf
PO:0000037anatomyshoot apex
PO:0000230anatomyinflorescence meristem
PO:0000293anatomyguard cell
PO:0008019anatomyleaf lamina base
PO:0009005anatomyroot
PO:0009006anatomyshoot system
PO:0009009anatomyplant embryo
PO:0009010anatomyseed
PO:0009025anatomyvascular leaf
PO:0009029anatomystamen
PO:0009030anatomycarpel
PO:0009031anatomysepal
PO:0009032anatomypetal
PO:0009046anatomyflower
PO:0009047anatomystem
PO:0009052anatomyflower pedicel
PO:0020030anatomycotyledon
PO:0020038anatomypetiole
PO:0020100anatomyhypocotyl
PO:0020137anatomyleaf apex
PO:0025022anatomycollective leaf structure
PO:0025195anatomypollen tube cell
PO:0025281anatomypollen
PO:0001054developmental stagevascular leaf senescent stage
PO:0001078developmental stageplant embryo cotyledonary stage
PO:0001081developmental stagemature plant embryo stage
PO:0001185developmental stageplant embryo globular stage
PO:0004507developmental stageplant embryo bilateral stage
PO:0007064developmental stageLP.12 twelve leaves visible stage
PO:0007095developmental stageLP.08 eight leaves visible stage
PO:0007098developmental stageLP.02 two leaves visible stage
PO:0007103developmental stageLP.10 ten leaves visible stage
PO:0007115developmental stageLP.04 four leaves visible stage
PO:0007123developmental stageLP.06 six leaves visible stage
PO:0007611developmental stagepetal differentiation and expansion stage
PO:0007616developmental stageflowering stage
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MEDDEDIRSQ GSDSPDPSSS PPAGRITVTV ASAGPPSYSL TPPGNSSQKD PDALALALLP  60
IQASGGGNNS SGRPTGGGGR EDCWSEAATA VLIDAWGERY LELSRGNLKQ KHWKEVAEIV  120
SSREDYGKIP KTDIQCKNRI DTVKKKYKQE KVRIANGGGR SRWVFFDKLD RLIGSTAKIP  180
TATSGVSGPV GGLHKIPMGI PMGSRSNLYH QQAKAATPPF NNLDRLIGAT ARVSAASFGG  240
SGGGGGGGSV NVPMGIPMSS RSAPFGQQGR TLPQQGRTLP QQQQQGMMVK RCSESKRWRF  300
RKRNASDSDS ESEAAMSDDS GDSLPPPPLS KRMKTEEKKK QDGDGVGNKW RELTRAIMRF  360
GEAYEQTENA KLQQVVEMEK ERMKFLKELE LQRMQFFVKT QLEISQLKQQ HGRRMGNTSN  420
DHHHSRKNNI NAIVNNNNDL GNN
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
At.392780.0flower| leaf| root
Expression -- Microarray ? help Back to Top
Source ID E-value
Genevisible256998_at0.0
Expression AtlasAT3G14180-
AtGenExpressAT3G14180-
ATTED-IIAT3G14180-
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00356DAP27203113Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT3G14180.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Interaction ? help Back to Top
Source Intact With
IntActSearch Q9LJG8
Phenotype -- Disruption Phenotype ? help Back to Top
Source Description
UniProtDISRUPTION PHENOTYPE: No visible phenotype under normal growth conditions. {ECO:0000269|PubMed:21330492}.
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT3G14180
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0006000.0AP000600.1 Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MAG2.
GenBankAY0721870.0AY072187.1 Arabidopsis thaliana unknown protein (At3g14180) mRNA, complete cds.
GenBankAY1138530.0AY113853.1 Arabidopsis thaliana unknown protein (At3g14180) mRNA, complete cds.
GenBankCP0026860.0CP002686.1 Arabidopsis thaliana chromosome 3, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_188034.10.0sequence-specific DNA binding transcription factor
SwissprotQ9LJG80.0ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A178V8Z70.0A0A178V8Z7_ARATH; ASIL2
STRINGAT3G14180.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM62622543
Representative plantOGRP4871684
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Fujita H, et al.
    An Arabidopsis MADS-box protein, AGL24, is specifically bound to and phosphorylated by meristematic receptor-like kinase (MRLK).
    Plant Cell Physiol., 2003. 44(7): p. 735-42
    [PMID:12881501]
  3. Yamada K, et al.
    Empirical analysis of transcriptional activity in the Arabidopsis genome.
    Science, 2003. 302(5646): p. 842-6
    [PMID:14593172]
  4. Wang Y, et al.
    Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis.
    Plant Physiol., 2008. 148(3): p. 1201-11
    [PMID:18775970]
  5. Willmann MR,Mehalick AJ,Packer RL,Jenik PD
    MicroRNAs regulate the timing of embryo maturation in Arabidopsis.
    Plant Physiol., 2011. 155(4): p. 1871-84
    [PMID:21330492]
  6. Nemoto K, et al.
    Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system.
    Phytochemistry, 2011. 72(10): p. 1136-44
    [PMID:21477822]
  7. Arabidopsis Interactome Mapping Consortium
    Evidence for network evolution in an Arabidopsis interactome map.
    Science, 2011. 333(6042): p. 601-7
    [PMID:21798944]
  8. Barr MS,Willmann MR,Jenik PD
    Is there a role for trihelix transcription factors in embryo maturation?
    Plant Signal Behav, 2012. 7(2): p. 205-9
    [PMID:22353863]