PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4BG032560.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 302aa MW: 32855.4 Da PI: 4.6795 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.4 | 6.9e-18 | 23 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eEd+l+v++++ lG++ W++Ia++++ gRt++++k++w+++l TRIDC4BG032560.4 23 RGNISKEEDDLIVKLHATLGNR-WSLIASHLP-GRTDNEIKNYWNSHL 68 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 302 aa Download sequence |
GLLRCGKSCR LRWINYLRDG VRRGNISKEE DDLIVKLHAT LGNRWSLIAS HLPGRTDNEI 60 KNYWNSHLSR QIHTFRRIYT TVSDTAITVD INKLSAAGKR RGGRTPGQSP RSSTKKKPVP 120 EPITKAKDES SPAGAASSVS SSPQSDEARS AVVDPDQNQP NNSISVSHTS DGPCSEDGTW 180 PMVMDPVDQT GVLEANCTVD QQMGLWEVNS SMNQIGIMED ESEMQALLSS SVTAENGLVG 240 IDPGGLSQVD HLLDMDWEGF ASHLWDQPAQ NGLLQPAEPQ AATGSESDEL ESFVSWLLSD 300 AC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G47460.1 | 6e-44 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4BG032560.4 |