PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG031600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WOX | ||||||||
Protein Properties | Length: 317aa MW: 32582.3 Da PI: 8.0795 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 47.7 | 2.7e-15 | 32 | 92 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++ TRIDC4BG031600.1 32 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLerfgAVGDANVFYWFQNRRSRSRR 92 89*****************99*************************************997 PP | |||||||
2 | Wus_type_Homeobox | 106.9 | 1.3e-34 | 31 | 94 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q TRIDC4BG031600.1 31 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQ 94 589***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 317 aa Download sequence |
MEGGSNSPDR QSSGGSPDER RSGGRGAGEP VRSRWTPKPE QILILESIFN SGMVNPPKDE 60 TVRIRKLLER FGAVGDANVF YWFQNRRSRS RRRQRQMQAA AAAAAAAAAA ASSATANSLP 120 AASATIGLPS GTGSVHPMAI GGCASQYEQQ ATSSSSSGST GGSSLGPFAA HGAGVPGAGV 180 GYLQASCGTS SPLASGLMAD VDTGGSDDLF AISRQMGFVG SPAGPSSSAP STAVQQQYYS 240 CQLPAATITV FINGVPMEVP RGPIDLRAMF GQDVVLLHST GTLLPVNDYG ILIQSLQMGE 300 SYFLVTIHIA SQVHSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03660.1 | 1e-35 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG031600.1 |