PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG026790.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YC
Protein Properties Length: 122aa    MW: 13726.6 Da    PI: 7.5121
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG026790.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC44.82.6e-141693098
             NF-YC 30 lkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
                      ++adedv +i+  +Pvl+s+a elf+ +l  rs+  + ++  +tl+   ++++v+r   fdfl++iv +
  TRIDC4BG026790.3  1 MQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQCVKRYSSFDFLTEIVNK 69
                      899**************************************************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MQADEDVGKI ALAVPVLVSR ALELFLQDLI DRSYKITLQS GAKTLNSFHL KQCVKRYSSF  60
DFLTEIVNKV PDLGGGESCG DERGLPRRRK FSNGSDPENE EPRSSKMVQF HHISAELNFL  120
SR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18690PRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12480.11e-39NF-YC family protein