PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG026790.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YC | ||||||||
Protein Properties | Length: 176aa MW: 20053.9 Da PI: 10.7227 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 64.6 | 1.8e-20 | 44 | 123 | 19 | 98 |
NF-YC 19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 +++P arikki++adedv +i+ +Pvl+s+a elf+ +l rs+ + ++ +tl+ ++++v+r fdfl++iv + TRIDC4BG026790.2 44 TRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQCVKRYSSFDFLTEIVNK 123 689*************************************************************************9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
TTKQETQSSR RTRKENTQKV DYDCRHRARR GVGVATKMRK KLGTRFPAAR IKKIMQADED 60 VGKIALAVPV LVSRALELFL QDLIDRSYKI TLQSGAKTLN SFHLKQCVKR YSSFDFLTEI 120 VNKVPDLGGG ESCGDERGLP RRRKFSNGSD PENEEPRSSK MVQFHHISAE LNFLSR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 140 | 144 | PRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12480.1 | 4e-51 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG026790.2 |