PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG022520.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 237aa    MW: 27184.1 Da    PI: 9.3014
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG022520.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.33.1e-171057148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT++Ed++lv+ v+++G ++W+ +a+  g++Rt+k+c++rw +yl
  TRIDC4BG022520.4 10 KGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYL 57
                      79********************************************97 PP
2Myb_DNA-binding55.21.6e-1764108248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       gr++++E+ l++++++++G++ W++Iar+++ gRt++++k++w++++
  TRIDC4BG022520.4  64 GRMSPQEEHLIIELHARWGNR-WSRIARRLP-GRTDNEIKNYWRTHM 108
                       89*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MVTVQDEMRK GPWTEQEDLQ LVCTVRLFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG  60
LKHGRMSPQE EHLIIELHAR WGNRWSRIAR RLPGRTDNEI KNYWRTHMRK KAQERKTNMS  120
PSSSSSSFTY QSCLLETAPI IRMDGGSTHN GTTCFSSVLK SNQSVMDGYS MDQIWKEIEA  180
PAMLPIDKKA CSNLPCPVLP SPMGDRYCPP EVVWKMDNGD LKMLAPQFGY GNGERSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.36e-77MYB family protein