PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG017510.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 378aa    MW: 41541.4 Da    PI: 5.5612
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG017510.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS214.27e-6673692373
               GRAS   2 velLlecAeavssgdlelaqalLarlsel..aspdg...dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                        ++lLl+ Aeav++gd + a a+ +rl  l   sp+     ++ Rla +f+++L++r+++ +++++  lp         s++++++++ +e+s
  TRIDC4BG017510.11   7 TDLLLTGAEAVEAGDPRFALAVFSRLDGLllGSPENaaaGSFDRLAYHFAQGLRSRISSASTSCS--LPEP-----LPSDRMSVQQIIQELS 91 
                        689***********************998885554422379*****************9322222..3222.....3568999********* PP

               GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                        P+ kf+h+taNqaIl+a++g+++v ++D++i++G+QWp+L+  La    g  s+ +T+v + +   ++  +e ++rL++fA++l++pf+++ 
  TRIDC4BG017510.11  92 PFAKFAHFTANQAILDATKGDTHVNVVDLNIGEGIQWPSLMSDLARH--GGMSFHLTAVTADADYTNDVHHESARRLSEFADSLNLPFQYSS 181
                        *********************************************84..6689********8888*************************** PP

               GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevL.klvkslsPkvvvvveqeadh.nse......sFlerflealeyy 264
                        l  ++ ed  l+e+  +++ +++ ++    +       +l s+ +++L  +vk l+Pk++v+ve+e+ + ++e      sF++ f+eal+++
  TRIDC4BG017510.11 182 LCLHSDED--LHEFFKNSKGSVIFSCDTTSMPY-----KLLSKLPALLpACVKLLQPKLMVIVEEELVRiGKEaslckaSFVDFFFEALHHF 266
                        85554444..47776666778888887744443.....45566778883579*************95443554566666************* PP

               GRAS 265 salfdsleaklpres..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee 354
                        +++f+sl++ ++  +     + vEre++g++i++ v + g+  +e +       + le+ G  +  ls  +++qa++l+  ++ +g++v +e
  TRIDC4BG017510.11 267 TTVFESLASCFAGGNqgACLRLVEREMVGPRIQDFVGQYGSVTVEVTA-----PQVLERYG--ACDLSGCNVAQARMLVWLFN-RGFEVVHE 350
                        *******988888885667899*******************9666655.....68899877..7899****************.******** PP

               GRAS 355 sgslvlgWkdrpLvsvSaW 373
                        +g lvl+Wk+rpL+svS+W
  TRIDC4BG017510.11 351 KGRLVLCWKSRPLTSVSVW 369
                        ******************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MEENSLTDLL LTGAEAVEAG DPRFALAVFS RLDGLLLGSP ENAAAGSFDR LAYHFAQGLR  60
SRISSASTSC SLPEPLPSDR MSVQQIIQEL SPFAKFAHFT ANQAILDATK GDTHVNVVDL  120
NIGEGIQWPS LMSDLARHGG MSFHLTAVTA DADYTNDVHH ESARRLSEFA DSLNLPFQYS  180
SLCLHSDEDL HEFFKNSKGS VIFSCDTTSM PYKLLSKLPA LLPACVKLLQ PKLMVIVEEE  240
LVRIGKEASL CKASFVDFFF EALHHFTTVF ESLASCFAGG NQGACLRLVE REMVGPRIQD  300
FVGQYGSVTV EVTAPQVLER YGACDLSGCN VAQARMLVWL FNRGFEVVHE KGRLVLCWKS  360
RPLTSVSVWA PILKERSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.16e-40GRAS family protein