PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG017420.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 428aa MW: 49138 Da PI: 7.3366

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG017420.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	81.4	1.2e-25	112	207	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt ++v++Li+a ++++e+ ++++ +kk++W+++sk+m erg+++sp+qC++k+++lnkryk+++++ +++ +++++++ +++d TRIDC4BG017420.2 112 KWTGSMVKLLITAASYTGEDPGADQggrrniaivQKKGKWKAISKVMGERGCSVSPQQCEDKFNDLNKRYKRLTDILGRGtACNVVENPALLD 204 7*******************987788899999******************************************55********* PP trihelix 84 qle 86 +++ TRIDC4BG017420.2 205 SMH 207 998 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
NLPTGNMMQG IPYSSLNVHG NSMQMHASSS GKQLFNQSQM LGSFAMPINR ATARDNPGFQ 60 FGEHEKKDHH HHHQHSHYSK DSISDEEHDM TEDVTDTQND KGKKGSAWHR MKWTGSMVKL 120 LITAASYTGE DPGADQGGRR NIAIVQKKGK WKAISKVMGE RGCSVSPQQC EDKFNDLNKR 180 YKRLTDILGR GTACNVVENP ALLDSMHHLS DKMKEDARKI LNSKHLFYEQ MCSYHNNNRV 240 NLPEDLALQH SLQVALRCKE EHDLRRDASA DPEEGEQSAD SDYEEHDEEH QTVHTNLRDS 300 YMNKRMCRAV DHGDVGFVTS SSNGVSGRFN PHDITLGINN AIPGGANLSF ARKDLTSQQI 360 EFQKHRLHTQ EQKLEVAKQR LKWERFRMKK DREIERMTLE NEQMMLQQKR LELQLRHQEL 420 ELELKVHV

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

NLPTGNMMQG IPYSSLNVHG NSMQMHASSS GKQLFNQSQM LGSFAMPINR ATARDNPGFQ  60
FGEHEKKDHH HHHQHSHYSK DSISDEEHDM TEDVTDTQND KGKKGSAWHR MKWTGSMVKL  120
LITAASYTGE DPGADQGGRR NIAIVQKKGK WKAISKVMGE RGCSVSPQQC EDKFNDLNKR  180
YKRLTDILGR GTACNVVENP ALLDSMHHLS DKMKEDARKI LNSKHLFYEQ MCSYHNNNRV  240
NLPEDLALQH SLQVALRCKE EHDLRRDASA DPEEGEQSAD SDYEEHDEEH QTVHTNLRDS  300
YMNKRMCRAV DHGDVGFVTS SSNGVSGRFN PHDITLGINN AIPGGANLSF ARKDLTSQQI  360
EFQKHRLHTQ EQKLEVAKQR LKWERFRMKK DREIERMTLE NEQMMLQQKR LELQLRHQEL  420
ELELKVHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	6e-87	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG017420.2