PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG017420.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 435aa MW: 49771.6 Da PI: 7.2203

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG017420.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	81.4	1.2e-25	116	211	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt ++v++Li+a ++++e+ ++++ +kk++W+++sk+m erg+++sp+qC++k+++lnkryk+++++ +++ +++++++ +++d TRIDC4BG017420.1 116 KWTGSMVKLLITAASYTGEDPGADQggrrniaivQKKGKWKAISKVMGERGCSVSPQQCEDKFNDLNKRYKRLTDILGRGtACNVVENPALLD 208 7*******************987788899999******************************************55********* PP trihelix 84 qle 86 +++ TRIDC4BG017420.1 209 SMH 211 998 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MEGSNLPTGN MMQGIPYSSL NVHGNSMQMH ASSSGKQLFN QSQMLGSFAM PINRATARDN 60 PGFQFGEHEK KDHHHHHQHS HYSKDSISDE EHDMTEDVTD TQNDKGKKGS AWHRMKWTGS 120 MVKLLITAAS YTGEDPGADQ GGRRNIAIVQ KKGKWKAISK VMGERGCSVS PQQCEDKFND 180 LNKRYKRLTD ILGRGTACNV VENPALLDSM HHLSDKMKED ARKILNSKHL FYEQMCSYHN 240 NNRVNLPEDL ALQHSLQVAL RCKEEHDLRR DASADPEEGE QSADSDYEEH DEEHQTVHTN 300 LRDSYMNKRM CRAVDHGDVG FVTSSSNGVS GRFNPHDITL GINNAIPGGA NLSFARKDLT 360 SQQIEFQKHR LHTQEQKLEV AKQRLKWERF RMKKDREIER MTLENEQMML QQKRLELQLR 420 HQELELELKG NANHA

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MEGSNLPTGN MMQGIPYSSL NVHGNSMQMH ASSSGKQLFN QSQMLGSFAM PINRATARDN  60
PGFQFGEHEK KDHHHHHQHS HYSKDSISDE EHDMTEDVTD TQNDKGKKGS AWHRMKWTGS  120
MVKLLITAAS YTGEDPGADQ GGRRNIAIVQ KKGKWKAISK VMGERGCSVS PQQCEDKFND  180
LNKRYKRLTD ILGRGTACNV VENPALLDSM HHLSDKMKED ARKILNSKHL FYEQMCSYHN  240
NNRVNLPEDL ALQHSLQVAL RCKEEHDLRR DASADPEEGE QSADSDYEEH DEEHQTVHTN  300
LRDSYMNKRM CRAVDHGDVG FVTSSSNGVS GRFNPHDITL GINNAIPGGA NLSFARKDLT  360
SQQIEFQKHR LHTQEQKLEV AKQRLKWERF RMKKDREIER MTLENEQMML QQKRLELQLR  420
HQELELELKG NANHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	4e-87	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG017420.1