PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG015250.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 179aa    MW: 19882.9 Da    PI: 10.1242
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG015250.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.81.3e-50191461128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                       lppGfrFhPtdeelv++yL++k+ g ++ +  vi+evd+yk+ePw+Lp+k+++   ++kewyfFs+rd+ky++g+r+nra+ +gyWkatg dk
  TRIDC4BG015250.6  19 LPPGFRFHPTDEELVMYYLCRKCGGLPIAA-PVIAEVDLYKFEPWRLPEKAAGggpDSKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADK 110
                       79*************************999.89***************65444455677********************************** PP

               NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +v s   + v +kk Lvfy g+ pkg+kt+W+mheyrl
  TRIDC4BG015250.6 111 PVGS--PRPVAIKKALVFYAGKPPKGVKTNWIMHEYRL 146
                       **99..779***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
QPPVHRTRMD YGFDGALQLP PGFRFHPTDE ELVMYYLCRK CGGLPIAAPV IAEVDLYKFE  60
PWRLPEKAAG GGPDSKEWYF FSPRDRKYPN GSRPNRAAGT GYWKATGADK PVGSPRPVAI  120
KKALVFYAGK PPKGVKTNWI MHEYRLADVD RSAAARKKSN NALRVTTLPA CPPPPSPLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.17e-81NAC family protein