PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG012450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 216aa MW: 23784.1 Da PI: 8.2515 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 136.1 | 1.2e-42 | 7 | 106 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++lp +reda++sl+yeAear+rdPvyG+v+ i+ lq +++q+++e TRIDC4BG012450.1 7 PCAACKLLRRKCTQGCVFAPYFPPDQPAKFANVHKVFGASNVSKLLNELPVAQREDAVNSLAYEAEARLRDPVYGCVAYISVLQLKIKQVREE 99 7******************************************************************************************** PP DUF260 94 lallkee 100 +a +++e TRIDC4BG012450.1 100 IADARKE 106 **99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MSSSNSPCAA CKLLRRKCTQ GCVFAPYFPP DQPAKFANVH KVFGASNVSK LLNELPVAQR 60 EDAVNSLAYE AEARLRDPVY GCVAYISVLQ LKIKQVREEI ADARKELAGY IGQAAYAPVV 120 PVQHPHAQYA AAGMGLVQPH PHPHQQMAMQ QQHPYHQQQI AEAQHLAAAV EVARAGQQQQ 180 QQHHHQHQQH EMMMMRQTYG NVHGAAAGPT VAVEPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66870.1 | 1e-60 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG012450.1 |