PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG011290.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 491aa MW: 54882.5 Da PI: 8.225

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG011290.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	38.7	1.8e-12	3	78	16	97
EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 16 lvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +++p++ +h ++ s t++l ++gr ++v + + g+ v+++GW Fv a++++e+D+++F ++g+s+f +++f TRIDC4BG011290.8 3 IRIPRELS-THlR--SRISDTIKLSAPNGRAYDVVV--TWEFGELVIRSGWDAFVTAHHIEENDTFLFIYHGNSNF--EIHIF 78 67888876.4524..45788**************..5556679*************************9999..66666 PP
2	B3	39.6	9.1e-13	169	254	9	98
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + k + + +p + + +h +++++s ++le ++g+ ++v+ +k+s+ +vl++ W Fv an+++ +D ++F+ + +++l+v +++ TRIDC4BG011290.8 169 VNVKDCSINIPLRLV-SHLKEEAGSAIIKLEAPDGNIYNVRA--SKHSEDqVVLQSDWDAFVAANHIQLNDLLIFHS--KGKTRLKVLALD 254 46678999****9.776678999*************..7777777***********************3..356666776665 PP
3	B3	40	6.9e-13	405	482	18	95
--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEE CS B3 18 lpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvk 95 ++ +f++e+ + +++tl+ ++ ++W +l k++r ++ +GW++F+ +n+L+ gD+++Fk+ +r ++ ++v+ TRIDC4BG011290.8 405 FSLEFCREYasT-LPGRDQTLI-LELEDKEWHTTL--HIKGSRKIIYRGWSKFACDNNLQLGDICLFKMAeRRtRGLAMRVH 482 457899999742.344555666.55688*****..66666678999******************87344455555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
NSIRIPRELS THLRSRISDT IKLSAPNGRA YDVVVTWEFG ELVIRSGWDA FVTAHHIEEN 60 DTFLFIYHGN SNFEIHIFNS HGCEKMASCF QSPSEIFGIF PPSEPCDHHV LNGQAAPNPR 120 HVQTQVEFDY TMSTGCHLTK SQDEKVVEIA RKIRSEIPLY VAIMKKLNVN VKDCSINIPL 180 RLVSHLKEEA GSAIIKLEAP DGNIYNVRAS KHSEDQVVLQ SDWDAFVAAN HIQLNDLLIF 240 HSKGKTRLKV LALDPSGCEK NSSCLDTKNF SKTGEGSVWI TDARPCTVEI IDLTSSGDDR 300 TEREDAGRSS GRRKQVPGSH AKARKMASAS SPSTKSGPDT HKLKHPISNN DNLQGPYRPP 360 YILARGITLT GCVEKKVQEK VQAIGSELPI YVAVMTKSCV SGNLFSLEFC REYASTLPGR 420 DQTLILELED KEWHTTLHIK GSRKIIYRGW SKFACDNNLQ LGDICLFKMA ERRTRGLAMR 480 VHIICKSGVF L

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

NSIRIPRELS THLRSRISDT IKLSAPNGRA YDVVVTWEFG ELVIRSGWDA FVTAHHIEEN  60
DTFLFIYHGN SNFEIHIFNS HGCEKMASCF QSPSEIFGIF PPSEPCDHHV LNGQAAPNPR  120
HVQTQVEFDY TMSTGCHLTK SQDEKVVEIA RKIRSEIPLY VAIMKKLNVN VKDCSINIPL  180
RLVSHLKEEA GSAIIKLEAP DGNIYNVRAS KHSEDQVVLQ SDWDAFVAAN HIQLNDLLIF  240
HSKGKTRLKV LALDPSGCEK NSSCLDTKNF SKTGEGSVWI TDARPCTVEI IDLTSSGDDR  300
TEREDAGRSS GRRKQVPGSH AKARKMASAS SPSTKSGPDT HKLKHPISNN DNLQGPYRPP  360
YILARGITLT GCVEKKVQEK VQAIGSELPI YVAVMTKSCV SGNLFSLEFC REYASTLPGR  420
DQTLILELED KEWHTTLHIK GSRKIIYRGW SKFACDNNLQ LGDICLFKMA ERRTRGLAMR  480
VHIICKSGVF L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	3e-17	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG011290.8