PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG011290.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 531aa    MW: 59719.8 Da    PI: 7.6746
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG011290.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.64.6e-13401181297
                       HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                       k + +++p++  ++    ++ s t++l  ++gr ++v +  +   g+ v+++GW  Fv a++++e+D+++F ++g+s+f   +++f
  TRIDC4BG011290.6  40 K-NSIRIPRELSTHLR--SRISDTIKLSAPNGRAYDVVV--TWEFGELVIRSGWDAFVTAHHIEENDTFLFIYHGNSNF--EIHIF 118
                       3.45999*99874444..45888****************..5556679***************************9999..66666 PP
2B339.51e-12209294998
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        + k + + +p + + +h +++++s  ++le ++g+ ++v+   +k+s+  +vl++ W  Fv an+++ +D ++F+   + +++l+v +++
  TRIDC4BG011290.6 209 VNVKDCSINIPLRLV-SHLKEEAGSAIIKLEAPDGNIYNVRA--SKHSEDqVVLQSDWDAFVAANHIQLNDLLIFHS--KGKTRLKVLALD 294
                       46678999******9.776678999*****************..7777777*************************3..356666776665 PP
3B339.97.8e-134455221895
                       --HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEE CS
                B3  18 lpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvk 95 
                       ++ +f++e+     + +++tl+   ++ ++W  +l    k++r ++ +GW++F+ +n+L+ gD+++Fk+  +r ++  ++v+
  TRIDC4BG011290.6 445 FSLEFCREYasT-LPGRDQTLI-LELEDKEWHTTL--HIKGSRKIIYRGWSKFACDNNLQLGDICLFKMAeRRtRGLAMRVH 522
                       457899999742.344555666.55688*******..66666678999********************87344455555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 531 aa     Download sequence    
GYCEMNEDCE NCAFWRDHYY WDHMGDEKKQ FSAVAKGDFK NSIRIPRELS THLRSRISDT  60
IKLSAPNGRA YDVVVTWEFG ELVIRSGWDA FVTAHHIEEN DTFLFIYHGN SNFEIHIFNS  120
HGCEKMASCF QSPSEIFGIF PPSEPCDHHV LNGQAAPNPR HVQTQVEFDY TMSTGCHLTK  180
SQDEKVVEIA RKIRSEIPLY VAIMKKLNVN VKDCSINIPL RLVSHLKEEA GSAIIKLEAP  240
DGNIYNVRAS KHSEDQVVLQ SDWDAFVAAN HIQLNDLLIF HSKGKTRLKV LALDPSGCEK  300
NSSCLDTKNF SKTGEGSVWI TDARPCTVEI IDLTSSGDDR TEREDAGRSS GRRKQVPGSH  360
AKARKMASAS SPSTKSGPDT HKLKHPISNN DNLQGPYRPP YILARGITLT GCVEKKVQEK  420
VQAIGSELPI YVAVMTKSCV SGNLFSLEFC REYASTLPGR DQTLILELED KEWHTTLHIK  480
GSRKIIYRGW SKFACDNNLQ LGDICLFKMA ERRTRGLAMR VHIICKSGVF L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-22B3 family protein