PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG011290.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 558aa    MW: 62789.3 Da    PI: 7.697
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG011290.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.81.9e-13671451297
                       HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                       k + +++p++  ++    ++ s t++l  ++gr ++v +  +   g+ vl++GW  Fv a++++e+D+++F ++g+s+f   +++f
  TRIDC4BG011290.3  67 K-NSIRIPRELSTHLR--SRISDTIKLSAPNGRAYDVVV--TWEFGELVLRSGWDAFVTAHHIEENDTFLFIYHGNSNF--EIHIF 145
                       3.45999*99874444..45888****************..555667****************************9999..66666 PP
2B339.41.1e-12236321998
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        + k + + +p + + +h +++++s  ++le ++g+ ++v+   +k+s+  +vl++ W  Fv an+++ +D ++F+   + +++l+v +++
  TRIDC4BG011290.3 236 VNVKDCSINIPLRLV-SHLKEEAGSAIIKLEAPDGNIYNVRA--SKHSEDqVVLQSDWDAFVAANHIQLNDLLIFHS--KGKTRLKVLALD 321
                       46678999******9.776678999*****************..7777777*************************3..356666776665 PP
3B339.78.4e-134725491895
                       --HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEE CS
                B3  18 lpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvk 95 
                       ++ +f++e+     + +++tl+   ++ ++W  +l    k++r ++ +GW++F+ +n+L+ gD+++Fk+  +r ++  ++v+
  TRIDC4BG011290.3 472 FSLEFCREYasT-LPGRDQTLI-LELEDKEWHTTL--HIKGSRKIIYRGWSKFACDNNLQLGDICLFKMAeRRtRGLAMRVH 549
                       457899999742.344555666.55688*******..66666678999********************87344455555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 558 aa     Download sequence    
FLNLDTDSLH YRVAISSLSS FAVHHRSGYC EMNEDCENCA FWRDHYYWEH MGDEKKQFSA  60
VAKGDFKNSI RIPRELSTHL RSRISDTIKL SAPNGRAYDV VVTWEFGELV LRSGWDAFVT  120
AHHIEENDTF LFIYHGNSNF EIHIFNSHGC EKMASCFQSP SEIFGIFPPS EPCDHHVLNG  180
QAAPNPRHVQ TQVEFDYTMS TGCHLTKSQD EKVVEIARKI RSEIPLYVAI MKKLNVNVKD  240
CSINIPLRLV SHLKEEAGSA IIKLEAPDGN IYNVRASKHS EDQVVLQSDW DAFVAANHIQ  300
LNDLLIFHSK GKTRLKVLAL DPSGCEKNSS CLDTKNFSKT GEGSVWITDA RPCTVEIIDL  360
TSSGDDRTER EDAGRSSGRR KQVPGSHAKA RKMASASSPS TKSGPDTHKL KHPISNNDNL  420
QGPYRPPYIL ARGITLTGCV EKKVQEKVQA IGSELPIYVA VMTKSCVSGN LFSLEFCREY  480
ASTLPGRDQT LILELEDKEW HTTLHIKGSR KIIYRGWSKF ACDNNLQLGD ICLFKMAERR  540
TRGLAMRVHI ICKSGVFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-22B3 family protein