PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG011290.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 507aa    MW: 56619.5 Da    PI: 8.3304
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG011290.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.74.3e-1316941297
                      HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                      k + +++p++  ++    ++ s t++l  ++gr ++v +  +   g+ v+++GW  Fv a++++e+D+++F ++g+s+f   +++f
  TRIDC4BG011290.2 16 K-NSIRIPRELSTHLR--SRISDTIKLSAPNGRAYDVVV--TWEFGELVIRSGWDAFVTAHHIEENDTFLFIYHGNSNF--EIHIF 94
                      3.45999*99874444..45888****************..5556679***************************9999..66666 PP
2B339.69.6e-13185270998
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        + k + + +p + + +h +++++s  ++le ++g+ ++v+   +k+s+  +vl++ W  Fv an+++ +D ++F+   + +++l+v +++
  TRIDC4BG011290.2 185 VNVKDCSINIPLRLV-SHLKEEAGSAIIKLEAPDGNIYNVRA--SKHSEDqVVLQSDWDAFVAANHIQLNDLLIFHS--KGKTRLKVLALD 270
                       46678999******9.776678999*****************..7777777*************************3..356666776665 PP
3B3407.2e-134214981895
                       --HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEE CS
                B3  18 lpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvk 95 
                       ++ +f++e+     + +++tl+   ++ ++W  +l    k++r ++ +GW++F+ +n+L+ gD+++Fk+  +r ++  ++v+
  TRIDC4BG011290.2 421 FSLEFCREYasT-LPGRDQTLI-LELEDKEWHTTL--HIKGSRKIIYRGWSKFACDNNLQLGDICLFKMAeRRtRGLAMRVH 498
                       457899999742.344555666.55688*******..66666678999********************87344455555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    
GDEKKQFSAV AKGDFKNSIR IPRELSTHLR SRISDTIKLS APNGRAYDVV VTWEFGELVI  60
RSGWDAFVTA HHIEENDTFL FIYHGNSNFE IHIFNSHGCE KMASCFQSPS EIFGIFPPSE  120
PCDHHVLNGQ AAPNPRHVQT QVEFDYTMST GCHLTKSQDE KVVEIARKIR SEIPLYVAIM  180
KKLNVNVKDC SINIPLRLVS HLKEEAGSAI IKLEAPDGNI YNVRASKHSE DQVVLQSDWD  240
AFVAANHIQL NDLLIFHSKG KTRLKVLALD PSGCEKNSSC LDTKNFSKTG EGSVWITDAR  300
PCTVEIIDLT SSGDDRTERE DAGRSSGRRK QVPGSHAKAR KMASASSPST KSGPDTHKLK  360
HPISNNDNLQ GPYRPPYILA RGITLTGCVE KKVQEKVQAI GSELPIYVAV MTKSCVSGNL  420
FSLEFCREYA STLPGRDQTL ILELEDKEWH TTLHIKGSRK IIYRGWSKFA CDNNLQLGDI  480
CLFKMAERRT RGLAMRVHII CKSGVFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.14e-17B3 family protein