PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG011290.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 527aa    MW: 59233.2 Da    PI: 7.3409
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG011290.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.64.6e-13361141297
                        HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                 B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                        k + +++p++  ++    ++ s t++l  ++gr ++v +  +   g+ v+++GW  Fv a++++e+D+++F ++g+s+f   +++f
  TRIDC4BG011290.11  36 K-NSIRIPRELSTHLR--SRISDTIKLSAPNGRAYDVVV--TWEFGELVIRSGWDAFVTAHHIEENDTFLFIYHGNSNF--EIHIF 114
                        3.45999*99874444..45888****************..5556679***************************9999..66666 PP
2B339.51e-12205290998
                        HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                 B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                         + k + + +p + + +h +++++s  ++le ++g+ ++v+   +k+s+  +vl++ W  Fv an+++ +D ++F+   + +++l+v +++
  TRIDC4BG011290.11 205 VNVKDCSINIPLRLV-SHLKEEAGSAIIKLEAPDGNIYNVRA--SKHSEDqVVLQSDWDAFVAANHIQLNDLLIFHS--KGKTRLKVLALD 290
                        46678999******9.776678999*****************..7777777*************************3..356666776665 PP
3B339.97.7e-134415181895
                        --HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEE CS
                 B3  18 lpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvk 95 
                        l+ +f++e+   + + +++tl+   ++ ++W   l    +++r ++ +GW++F+++n+L+ gD+++Fk+  +r ++  ++v+
  TRIDC4BG011290.11 441 LSLEFCKEYasTL-PSRDQTLI-LELEDKEWHTAL--HVNGSRKIIYGGWSKFASDNNLQLGDICLFKMAeRRtRGLAMRVH 518
                        67899****7533.34555666.55789*******..66777778999********************87344455555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    
MNEDCENCAF WRDHYYWDHM GDEKKQFSAV AKGDFKNSIR IPRELSTHLR SRISDTIKLS  60
APNGRAYDVV VTWEFGELVI RSGWDAFVTA HHIEENDTFL FIYHGNSNFE IHIFNSHGCE  120
KMASCFQSPS EIFGIFPPSE PCDHHVLNGQ AAPNPRHVQT QVEFDYTMST GCHLTKSQDE  180
KVVEIARKIR SEIPLYVAIM KKLNVNVKDC SINIPLRLVS HLKEEAGSAI IKLEAPDGNI  240
YNVRASKHSE DQVVLQSDWD AFVAANHIQL NDLLIFHSKG KTRLKVLALD PSGCEKNSSC  300
FDTKNFSKAG EGSVWITDAR PCTVEIIDLT SSDDDHTERE DAGRSSRRRK QVPGSHAKAR  360
KMALASSPST KSGSDTHKLK HPISNNDNLQ EPSRPPYILA RGITLTGPVE KKVQEKVQAI  420
GSELPIYVAV MTKSCVCGHP LSLEFCKEYA STLPSRDQTL ILELEDKEWH TALHVNGSRK  480
IIYGGWSKFA SDNNLQLGDI CLFKMAERRT RGLAMRVHII CKSGVFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1346351SRRRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-22B3 family protein