PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG011230.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 341aa    MW: 39072 Da    PI: 9.2156
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG011230.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.82.6e-20391191298
                       HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        ++r+++p kf++++  +   ++t++le+++g++++v +  +    + vl++GW+eFv+a+g+  gDf+vF +dg+s f  +v +f+
  TRIDC4BG011230.2  39 FRDRMIIPDKFVQKFRRQ--ITRTVKLESRNGNTFDVHV--TEDLHKLVLQSGWEEFVSAHGISMGDFLVFNYDGNSWF--KVLIFE 119
                       4678***********866..6679***************..999999********************************..888876 PP
2B3474.7e-152603401599
                       -EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  15 rlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        l + +++ae +       e+ + ++  ++g+ W+v++++++++++ +l+ GW++Fv  n+L+ gD+++Fkl ++++ ++ v ++rk
  TRIDC4BG011230.2 260 TLEICREYAEVYlpF----ED-ETIVLRRHGKIWKVRCCISQYGSKRLLK-GWRQFVCGNNLRLGDICLFKLLKNKKYTMDVYIIRK 340
                       577888888777432....22.4555677*********997777665565.**********************99***9****9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MYKSSTGCKM SSPWSKRGDI AAAANEQDNH FFKVMIGDFR DRMIIPDKFV QKFRRQITRT  60
VKLESRNGNT FDVHVTEDLH KLVLQSGWEE FVSAHGISMG DFLVFNYDGN SWFKVLIFEP  120
SGCERLSSSF LPMETAPYEG QEWGEKLTGT LSMRHDLPMI RSPQSERGTM IVQWDNSNHG  180
ENIMVLGSSS APSSESSGCI SSSEDDLQAH PARRLILLRG TCPTGSQKKK LKVKIRDIYS  240
EIPIVGCTIR KSSIHGKPYT LEICREYAEV YLPFEDETIV LRRHGKIWKV RCCISQYGSK  300
RLLKGWRQFV CGNNLRLGDI CLFKLLKNKK YTMDVYIIRK E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-23B3 family protein