PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG011220.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 309aa    MW: 34414.8 Da    PI: 8.5553
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG011220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.35.8e-18421231098
                       HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        +++  ++lp +fa++++g    s  + l+ +sg+sW++k+   +  +++vl++GWkeFv+ +g+ egD ++Fk+ g s+f   v +f+
  TRIDC4BG011220.1  42 DFTQ-SMSLPGRFAKNFNGR--ISEVINLKPPSGKSWSIKV--AGDTDEVVLRSGWKEFVDGHGIGEGDRLLFKYGGASSF--DVLMFD 123
                       4444.49*******888776..6779***************..********************************999999..777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
LIPSQMQKMG KNCERCAEWQ EHCYWSHMAD ENKHFFKLMV GDFTQSMSLP GRFAKNFNGR  60
ISEVINLKPP SGKSWSIKVA GDTDEVVLRS GWKEFVDGHG IGEGDRLLFK YGGASSFDVL  120
MFDSTGCQKP PPPRPVKRRA CDDNDIAENS ARAKGRRCGY QASNKAEERA PHPPPAAKGD  180
GAGLEMTLYR GTGKSIARAG HEDVDMDHGE AAAKNRYYFC KNGPVSEFHL TEEDKEEISS  240
VPVPTEPRNP VFVNVMHPNH VCGTNRTSIV RVPSEFVGKY LGTIGKEIIL RRASGKGRWH  300
VRYASGDHY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134139RPVKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.15e-24B3 family protein