PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG009270.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 529aa MW: 57000.9 Da PI: 7.4513

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG009270.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75	8e-24	133	176	2	45
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e TRIDC4BG009270.1 133 LEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKHVEG 176 69***************************************986 PP
2	QLQ	61.2	2.8e-21	66	102	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKyLaan vP++Ll++i++ TRIDC4BG009270.1 66 GPFTPSQWMELEHQALIYKYLAANIAVPHNLLVPIRR 102 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
SDFLPPLACL PLSRKYYTFI CFGFAFLSCT ACLVAHLLVV LLSWVPGLSS VSLSASIQNA 60 MARVRGPFTP SQWMELEHQA LIYKYLAANI AVPHNLLVPI RRSVTSLYPS AYFGSSTLGW 120 GPFQLGYSGS ADLEPGRCRR TDGKKWRCSR DAVADQKYCE RHMNRGRHRS RKHVEGQPGH 180 AAKAMPATVA AAAAQPGALA TGGGGGATAG AAAICHEQQP LKNYAANTID PCSLQYNREM 240 VSKQQQHECE QVQDSDTLSM LTSMSARNTN TGSMFPFSKE HHNHNPFEVT SSRPDYGLVS 300 SDSLMSSPHS SLENVNLLTS HSQRALSNEQ QSSLSLQHFA DWPRTPSQQG QGGGGLSWPD 360 AEDMQAHQRT QLSVSAAPMA SPDLSSASTS PIHEKLMLSP LKLSREYSPI GLSIAATAAA 420 AKDEGEANWM PMFRDSSMGG PLGEALNKNN GGNMEAKNYL SASLNLMTDA WDSSPLESSP 480 VGVLQRTAFG SVSSSTGSSP RQEYHGVYDG NPRDDLGSIV VNHPSIRLT

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

SDFLPPLACL PLSRKYYTFI CFGFAFLSCT ACLVAHLLVV LLSWVPGLSS VSLSASIQNA  60
MARVRGPFTP SQWMELEHQA LIYKYLAANI AVPHNLLVPI RRSVTSLYPS AYFGSSTLGW  120
GPFQLGYSGS ADLEPGRCRR TDGKKWRCSR DAVADQKYCE RHMNRGRHRS RKHVEGQPGH  180
AAKAMPATVA AAAAQPGALA TGGGGGATAG AAAICHEQQP LKNYAANTID PCSLQYNREM  240
VSKQQQHECE QVQDSDTLSM LTSMSARNTN TGSMFPFSKE HHNHNPFEVT SSRPDYGLVS  300
SDSLMSSPHS SLENVNLLTS HSQRALSNEQ QSSLSLQHFA DWPRTPSQQG QGGGGLSWPD  360
AEDMQAHQRT QLSVSAAPMA SPDLSSASTS PIHEKLMLSP LKLSREYSPI GLSIAATAAA  420
AKDEGEANWM PMFRDSSMGG PLGEALNKNN GGNMEAKNYL SASLNLMTDA WDSSPLESSP  480
VGVLQRTAFG SVSSSTGSSP RQEYHGVYDG NPRDDLGSIV VNHPSIRLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	5e-47	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG009270.1