PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG009100.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 270aa    MW: 29851.8 Da    PI: 7.6159
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG009100.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.4e-11102150355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC4BG009100.7 102 NSHSLAERLRRKKISERMKLLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 150
                       58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
METSIILAGT FSQNIQMSDE HSGGMKKRKG TDECIALLNP SASSKNVGDQ QTKVSSQPER  60
NSAERDNRKI SPKTQSKEDS SDGDGTRENY VHFRAKRGQA TNSHSLAERL RRKKISERMK  120
LLQDLVPGCN KITGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPELGFD IEQILSKQVM  180
LSQDRRLGFY GADPGSSALI AHFNQGMMHP DMMCNASNPA GALHGTIHDI SMMNQMPEMW  240
ETLQNIPHMN FNPAVAADSS TNNAGICNVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-55bHLH family protein