PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG005160.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 285aa    MW: 32711 Da    PI: 8.6111
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG005160.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.71.4e-1158137190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                        +fYn Y+ e GF +r  ks+ + + +    ++ vC + gk+  e+++         + r++C a + + ++kd+ w++++ +  HnH+l+
  TRIDC4BG005160.10  58 DFYNLYSWEKGFGIRYGKSRLNVNRT-KCIQEIVCGCAGKPIVENTR---------SCRCECPALVILLRSKDNGWYIAEHRDGHNHSLS 137
                        6*****************99995555.566789******99886555.........99******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
WTQSRVRLGA AAEGRAPCSD RVTALEKTVR EFAEHPGDIV MIKPKIGTTF DSLGEAYDFY  60
NLYSWEKGFG IRYGKSRLNV NRTKCIQEIV CGCAGKPIVE NTRSCRCECP ALVILLRSKD  120
NGWYIAEHRD GHNHSLSQTY DQTIHWPSHK HINVYSMDLV KQLRQNNVNL AKVYNIIGSS  180
FGKMENVSFT KRALRTLCGK ISREQSEDDV RKTMEVFQEL CSKDQQFTYR VQADNEGRIS  240
NLMWATGNSR LQYNFFGDVV TFDTTYRTNL YDIPFGLFVG VNNHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.18e-27FAR1 family protein