PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG005070.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 396aa MW: 44361.4 Da PI: 10.6747

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG005070.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31.9	2.3e-10	173	253	12	99
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++++++p + ++ g+ s t++le ++g + + + ++k g+ vl++GW +Fv ++++e+ ++ F + g+s+f +v++f++ TRIDC4BG005070.9 173 FRHNMCIPQEVGNHLGS--MISETIKLEAPNG-IFHIGV--CRKTGELVLQSGWDKFVAMHHIEENYSFWFVYRGNSTF--KVRIFNS 253 45679*999955554..47889*998.688899..9999**************************999999..9999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
PPPASLLRLR PATPRRPRSG APPPPSPAST PYKICERRRR QWRPRVSAPP PAPPRRRRWG 60 QIRLLHPSPI YGSRRPPPAA LNRASRRPGA PRVPPPTSPV HEPGRPQISR TSVHYPPQAA 120 APLPRLSTRS EWRRLQEERR SARESCTMWW QHYLLNHVGD DKTHFVAMAT GGFRHNMCIP 180 QEVGNHLGSM ISETIKLEAP NGIFHIGVCR KTGELVLQSG WDKFVAMHHI EENYSFWFVY 240 RGNSTFKVRI FNSNDHEMTT SCSQPPQSFG GVPSAATCDH HVLNGYEAHM LNERASVEFG 300 VDLEPHSSGN LEGPSQHSYI LAAGITLGAV ETKKVEEKVQ AIQSALPIFV TVMTKTWVNG 360 RNLFKIYSTY EERKASHAPG RGKNDGVASQ IGNRCD

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

PPPASLLRLR PATPRRPRSG APPPPSPAST PYKICERRRR QWRPRVSAPP PAPPRRRRWG  60
QIRLLHPSPI YGSRRPPPAA LNRASRRPGA PRVPPPTSPV HEPGRPQISR TSVHYPPQAA  120
APLPRLSTRS EWRRLQEERR SARESCTMWW QHYLLNHVGD DKTHFVAMAT GGFRHNMCIP  180
QEVGNHLGSM ISETIKLEAP NGIFHIGVCR KTGELVLQSG WDKFVAMHHI EENYSFWFVY  240
RGNSTFKVRI FNSNDHEMTT SCSQPPQSFG GVPSAATCDH HVLNGYEAHM LNERASVEFG  300
VDLEPHSSGN LEGPSQHSYI LAAGITLGAV ETKKVEEKVQ AIQSALPIFV TVMTKTWVNG  360
RNLFKIYSTY EERKASHAPG RGKNDGVASQ IGNRCD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	37	58	RRRRQWRPRVSAPPPAPPRRRR
2	38	59	RRRRQWRPRVSAPPPAPPRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	2e-12	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG005070.9