PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG003830.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 348aa MW: 39071.6 Da PI: 9.0554

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG003830.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74	1.7e-23	78	122	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++ +k+CErH++r+r+rsrk++e+ TRIDC4BG003830.10 78 DPEPGRCRRTDGKKWRCSKEAMAEHKYCERHINRNRHRSRKPVEN 122 79****************************************997 PP
2	QLQ	55.1	2.3e-19	19	54	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT++Q+++L++Q+l+yKyL+a++P+P+ Ll i+k TRIDC4BG003830.10 19 PFTPSQWMELEHQALIYKYLNAKAPIPSGLLISISK 54 8*****************************999975 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MDFGRSNEQR LLLARSKMPF TPSQWMELEH QALIYKYLNA KAPIPSGLLI SISKSFRPSS 60 DRMPWRPVYQ GFTNADSDPE PGRCRRTDGK KWRCSKEAMA EHKYCERHIN RNRHRSRKPV 120 ENQTRKNAKE TPDAGSLSAA VSHGGCNKKA KAGDELKPGS VSYWTDNLNR AMVSKARGSN 180 PEDGNSAPLL NSTNQQHTLS LFSQLKQQSK PDKFSPAVDS ESISSNTVLK PWERSNQQSS 240 KDVSSTTLHD RGCLQSVLQD FSMHKNESQK INASVPSTFY SSTEGRHISC LASNMMQVQE 300 DCISSSWEIP QGGPLGEILT NSKNTDDLTN KCESRSYGWL LSLDEHEM

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MDFGRSNEQR LLLARSKMPF TPSQWMELEH QALIYKYLNA KAPIPSGLLI SISKSFRPSS  60
DRMPWRPVYQ GFTNADSDPE PGRCRRTDGK KWRCSKEAMA EHKYCERHIN RNRHRSRKPV  120
ENQTRKNAKE TPDAGSLSAA VSHGGCNKKA KAGDELKPGS VSYWTDNLNR AMVSKARGSN  180
PEDGNSAPLL NSTNQQHTLS LFSQLKQQSK PDKFSPAVDS ESISSNTVLK PWERSNQQSS  240
KDVSSTTLHD RGCLQSVLQD FSMHKNESQK INASVPSTFY SSTEGRHISC LASNMMQVQE  300
DCISSSWEIP QGGPLGEILT NSKNTDDLTN KCESRSYGWL LSLDEHEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	4e-45	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG003830.10