PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG003830.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 372aa MW: 41609.5 Da PI: 9.0361

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG003830.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	73.8	1.8e-23	102	146	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++ +k+CErH++r+r+rsrk++e+ TRIDC4BG003830.1 102 DPEPGRCRRTDGKKWRCSKEAMAEHKYCERHINRNRHRSRKPVEN 146 79****************************************997 PP
2	QLQ	55	2.5e-19	43	78	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT++Q+++L++Q+l+yKyL+a++P+P+ Ll i+k TRIDC4BG003830.1 43 PFTPSQWMELEHQALIYKYLNAKAPIPSGLLISISK 78 8*****************************999975 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
YPSPFLDEQK MLSFSKAAAP PSSGMDFGRS NEQRLLLARS KMPFTPSQWM ELEHQALIYK 60 YLNAKAPIPS GLLISISKSF RPSSDRMPWR PVYQGFTNAD SDPEPGRCRR TDGKKWRCSK 120 EAMAEHKYCE RHINRNRHRS RKPVENQTRK NAKETPDAGS LSAAVSHGGC NKKAKAGDEL 180 KPGSVSYWTD NLNRAMVSKA RGSNPEDGNS APLLNSTNQQ HTLSLFSQLK QQSKPDKFSP 240 AVDSESISSN TVLKPWERSN QQSSKDVSST TLHDRGCLQS VLQDFSMHKN ESQKINASVP 300 STFYSSTEGR HISCLASNMM QVQEDCISSS WEIPQGGPLG EILTNSKNTD DLTNKCESRS 360 YGWLLSLDEH EM

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

YPSPFLDEQK MLSFSKAAAP PSSGMDFGRS NEQRLLLARS KMPFTPSQWM ELEHQALIYK  60
YLNAKAPIPS GLLISISKSF RPSSDRMPWR PVYQGFTNAD SDPEPGRCRR TDGKKWRCSK  120
EAMAEHKYCE RHINRNRHRS RKPVENQTRK NAKETPDAGS LSAAVSHGGC NKKAKAGDEL  180
KPGSVSYWTD NLNRAMVSKA RGSNPEDGNS APLLNSTNQQ HTLSLFSQLK QQSKPDKFSP  240
AVDSESISSN TVLKPWERSN QQSSKDVSST TLHDRGCLQS VLQDFSMHKN ESQKINASVP  300
STFYSSTEGR HISCLASNMM QVQEDCISSS WEIPQGGPLG EILTNSKNTD DLTNKCESRS  360
YGWLLSLDEH EM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	7e-45	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG003830.1