PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG066940.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 319aa    MW: 34020.6 Da    PI: 10.3352
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG066940.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.82.2e-12174218347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
  TRIDC4AG066940.2 174 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 218
                       7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
RAWPTAKGSA RVRPTRPIPR ARSRPPIPTS LLADKPPSLR APPPLTTPMA SQGAATAAWT  60
NEEDKAFENA VAAGAPPPLD GPPEECWFAA LAASVPARST EEVRRHYEAL VEDVGAIDAG  120
RVPLPRYAGE DSSSAAATAA AAPGKDRRED RKSFESDSGK GCSKAEQERR KGIPWTEEEH  180
RLFLLGLDKF GKGDWRSISR NFVISRTPTQ VASHAQKYFI RLNSMNRDRR RSSIHDITSI  240
NNAAQAVPPI TGQAPAALGG PPGGMMKHPG MVGMYGGAPM GHPVAGHMVP AAVGTPVMFP  300
PRPGHPPYAM PVGYPAPHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.11e-60MYB family protein