PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG063790.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 228aa MW: 24647.5 Da PI: 12.3494 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.7 | 2.5e-17 | 40 | 91 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ grWv+e+r ps+ + r++lg+f ++e Aa+a++ a+++l+g TRIDC4AG063790.1 40 PVYRGVRRRGAAGRWVCEVRQPSK---KSRIWLGTFASPEAAARAHDVAALALHG 91 68****************999854...6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MDRCGAGLYG VVDGGGYATV TSAPPKRPAG RTKFRETRHP VYRGVRRRGA AGRWVCEVRQ 60 PSKKSRIWLG TFASPEAAAR AHDVAALALH GRAACLNFAD SAALLAVDPA TLRTPQDIRA 120 AAMALARAAC PHDGAPSSAS ALQAASAPAP AMVMMQDAAA APVRQLRHVR RLGGPGPAFP 180 LLLRRDERLR RRLAKHRAHE RSRRGRQLRR RRRRALELLI ASGRSSSL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 190 | 212 | RRRLAKHRAHERSRRGRQLRRRR |
2 | 206 | 214 | RQLRRRRRR |
3 | 209 | 214 | RRRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 8e-26 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG063790.1 |