PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4AG063770.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 214aa MW: 21985.3 Da PI: 6.5059 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.4 | 7.5e-18 | 38 | 89 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ grWv+e+r+p +k+ r++lg+f ++e Aa+a++ a+++l+g TRIDC4AG063770.2 38 PVYRGVRRRGAAGRWVCEVREP---NKKSRIWLGTFASPEAAARAHDVAALALRG 89 68****************9998...347*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 214 aa Download sequence |
STTGGVGDNG QGGGYATVTS APPKRPAGRT KFRETRHPVY RGVRRRGAAG RWVCEVREPN 60 KKSRIWLGTF ASPEAAARAH DVAALALRGR AACLNFADSA TLLAVDPATL RTPDDIRAAA 120 IALAETACPA APASSSSVAA AVASAPAPPM TMMQFDDYAM QYGGIGDLDQ HSYYYDGLSA 180 AGGDGPSGSH MDGADDDCNG SGGYGAGEVA LWSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G25480.1 | 2e-24 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4AG063770.2 |