PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG062440.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 402aa MW: 43882.2 Da PI: 7.4093

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG062440.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.5	6.4e-50	11	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +ppGfrFhPt+eel+++yL+kkv++++++l +vi+++d++k+ePwd+++ ++ + +++wy Fs++dkky+ g+r+nrat++g+Wkatg+dk TRIDC4AG062440.2 11 VPPGFRFHPTEEELLTYYLAKKVASQRIDL-DVIPDIDLNKLEPWDIQErcRIGTgPQNDWYLFSHKDKKYPMGTRTNRATAAGFWKATGRDK 102 69**************************.9***********953444442456****************************** PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++s+ ++ +g++ktLvfykgrap+g+k+dW+mheyrle TRIDC4AG062440.2 103 AIYSAaGSGRIGMRKTLVFYKGRAPHGRKSDWIMHEYRLE 142 977788**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MSISVNGQSV VPPGFRFHPT EEELLTYYLA KKVASQRIDL DVIPDIDLNK LEPWDIQERC 60 RIGTGPQNDW YLFSHKDKKY PMGTRTNRAT AAGFWKATGR DKAIYSAAGS GRIGMRKTLV 120 FYKGRAPHGR KSDWIMHEYR LEDAVPVNPG DATYYSSASF PIHGVAGDQS STQEDGWVIC 180 RVFKKKNIVA QRQAGQNHGG GGAASNKLVD AGAMERSQSN CSSMLAAASD HAKAQMTHCS 240 GSDDGLDHIL SYMGRSSTTS CRQETKPTNP SSSVLDHLIN RVCHSGSSTL YDKFMKLPPL 300 EHVVPGRLLP PPPEYSGDWE ALDRLAAYEL SGLSNPALAE TMNDMSYIAD ELGGAASYSG 360 GGTLHPPSFT GAGDGDLWSL ARPVSSLHAD LTMTWFKPRF YG

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MSISVNGQSV VPPGFRFHPT EEELLTYYLA KKVASQRIDL DVIPDIDLNK LEPWDIQERC  60
RIGTGPQNDW YLFSHKDKKY PMGTRTNRAT AAGFWKATGR DKAIYSAAGS GRIGMRKTLV  120
FYKGRAPHGR KSDWIMHEYR LEDAVPVNPG DATYYSSASF PIHGVAGDQS STQEDGWVIC  180
RVFKKKNIVA QRQAGQNHGG GGAASNKLVD AGAMERSQSN CSSMLAAASD HAKAQMTHCS  240
GSDDGLDHIL SYMGRSSTTS CRQETKPTNP SSSVLDHLIN RVCHSGSSTL YDKFMKLPPL  300
EHVVPGRLLP PPPEYSGDWE ALDRLAAYEL SGLSNPALAE TMNDMSYIAD ELGGAASYSG  360
GGTLHPPSFT GAGDGDLWSL ARPVSSLHAD LTMTWFKPRF YG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	2e-98	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG062440.2