PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG062370.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 405aa MW: 43546.5 Da PI: 7.1237 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 161.4 | 3.4e-50 | 11 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +ppGfrFhPt+eel+++yL+kkv++++++l +vi++vd++k+ePwd+++ ++ + +++wy Fs++dkky+tg+r+nrat++g+Wkatg+dk TRIDC4AG062370.3 11 VPPGFRFHPTEEELLTYYLAKKVASQRIDL-DVIPDVDLNKLEPWDIQErcRIGTgPQNDWYLFSHKDKKYPTGTRTNRATAAGFWKATGRDK 102 69****************************.9***************953444442456********************************** PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++s+ ++ +g++ktLvfykgrap+g+k+dW+mheyrl TRIDC4AG062370.3 103 GIYSAaGSGRIGMRKTLVFYKGRAPHGHKSDWIMHEYRL 141 ****977788***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence |
MSISVNGQSV VPPGFRFHPT EEELLTYYLA KKVASQRIDL DVIPDVDLNK LEPWDIQERC 60 RIGTGPQNDW YLFSHKDKKY PTGTRTNRAT AAGFWKATGR DKGIYSAAGS GRIGMRKTLV 120 FYKGRAPHGH KSDWIMHEYR LDDAVAAATS LVFAAGDASS YYSGISSPVR GVAGDQSPPA 180 QEDGWVICRV FRKKNIVVQH QNGGGAASNK LVGAGAMEYS QSNCSSAVTA ASDKAKAHMH 240 QQQHLPHSDD ALDHILSYMG RSSTASCKQE TKPTNPSSSA LDHLINGACH SGSSTLQYDK 300 FMKLPPLEHV VPGGLLPPPA EYGRDWDDLD RLAAYELNGL SHPASANTTN SMSYIADELG 360 GTTSYSGGGT LHASSVTGAG DGDLWSLARS VSSLHADLAI TCFNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 2e-87 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG062370.3 |