PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG058790.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 374aa MW: 43056.1 Da PI: 5.7635

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG058790.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	42.2	1.5e-13	53	133	13	99
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++ +v+p + +++++ + +++le+++g s v + k +++ ++t GW++Fv +L+ gD ++F+++g+s+f +v +f+k TRIDC4AG058790.1 53 RDEMVIPEELVQRFKRE--ILGEIKLETRNGDSHAVVV--AKIQEKRIFTVGWRQFVANYDLQIGDLLMFRYKGNSQF--NVIIFDK 133 5779*****999755..5559***********..88888889***********************999..8888875 PP
2	B3	33.4	7.8e-11	203	287	15	99
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++p +e+++++ +++++le+++ rs+++ + + + ++ v++ GW +F + gL++gD++v+ ++g+s+f v +f+k TRIDC4AG058790.1 203 EMIIPEGILERFKSE--FPREIKLETQNRRSYKIGVAEnkldTCYNQKLVFSVGWGKFIETFGLQTGDTIVLIYNGNSQF--SVIIFDK 287 589999999999755..8889*************5545544444559*************************9999..8888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
LHTSGSQLEG EPRAYSNGMC TSCESCIRRD EYYYRNLDDE KKYFLVLMIG DFRDEMVIPE 60 ELVQRFKREI LGEIKLETRN GDSHAVVVAK IQEKRIFTVG WRQFVANYDL QIGDLLMFRY 120 KGNSQFNVII FDKLGREKAS SAVLDPFIPR VQDRGNEAHE IGSSEKMDVQ CGRCNNWLEY 180 HYADLDNENK YFLMLMMGDF QYEMIIPEGI LERFKSEFPR EIKLETQNRR SYKIGVAENK 240 LDTCYNQKLV FSVGWGKFIE TFGLQTGDTI VLIYNGNSQF SVIIFDKHGC EKALSVIVDP 300 VPPPVQGRRP CSTDIVKSSH FLPRPMQRQP FIIVNGLLLE SPPTEGQWRA QLEMDKSCQG 360 SRAAINTPPF ESSG

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

LHTSGSQLEG EPRAYSNGMC TSCESCIRRD EYYYRNLDDE KKYFLVLMIG DFRDEMVIPE  60
ELVQRFKREI LGEIKLETRN GDSHAVVVAK IQEKRIFTVG WRQFVANYDL QIGDLLMFRY  120
KGNSQFNVII FDKLGREKAS SAVLDPFIPR VQDRGNEAHE IGSSEKMDVQ CGRCNNWLEY  180
HYADLDNENK YFLMLMMGDF QYEMIIPEGI LERFKSEFPR EIKLETQNRR SYKIGVAENK  240
LDTCYNQKLV FSVGWGKFIE TFGLQTGDTI VLIYNGNSQF SVIIFDKHGC EKALSVIVDP  300
VPPPVQGRRP CSTDIVKSSH FLPRPMQRQP FIIVNGLLLE SPPTEGQWRA QLEMDKSCQG  360
SRAAINTPPF ESSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	3e-13	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG058790.1