PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG056280.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 300aa MW: 32739.1 Da PI: 4.5443 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.4 | 1.4e-19 | 54 | 105 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ eq+++Le+ Fe +++++ e+++++A+ lgL rqV vWFqNrRa++k TRIDC4AG056280.4 54 RRLALEQVRALERSFETDNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 105 467789*********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 129 | 1.9e-41 | 52 | 143 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl+ eqv++LE+sFe+++kL+perK+++ar+Lgl+prqvavWFqnrRAR+ktkqlE+d++aL++++dal+++ ++L++++++L++e++e TRIDC4AG056280.4 52 KKRRLALEQVRALERSFETDNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDFNALRARHDALRADCDALRRDKDALAAEIHE 143 9**************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
LRRAIGIGEK LAFAEKENLL AAYMEHDEPE LEEADEEEEE EERAMSCGLG GKKRRLALEQ 60 VRALERSFET DNKLDPERKA RIARDLGLHP RQVAVWFQNR RARWKTKQLE RDFNALRARH 120 DALRADCDAL RRDKDALAAE IHELREKLST KPETSVKAEA AGNADAAEER LQQATMIGAA 180 VCKDGSSDSD SSAVFNDEAS PYSGAVFEQQ GFMGFGASFL DSASAAAATT GGGCSSLPML 240 EPKWPGAYPY DAGRSGGYGF TEEWLAGSDA IGNDGSAAFF SEEHVSNLNF GWCSSGAEGF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 100 | 108 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 2e-30 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG056280.4 |