PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG053450.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 159aa    MW: 18290.2 Da    PI: 4.5964
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG053450.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.21.3e-1748141199
                       EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                       f+k  t++ +++ + +++pk+f+ e+   ++  e   +++ de   +  + ++ ++++++++l+kGW+eF+ + +L+ gD +vF+l+++ +f 
  TRIDC4AG053450.2  48 FVKPITHACASRANFMTIPKQFT-EYlpAHD--E--PVVVVDEADDESHMMYNASRQGRHCYLSKGWREFAVDYDLENGDCLVFQLIESAKF- 134
                       78888888999999********9.6734322..4..499*************88888888*************************9986666. PP

                       .EEEEE-S CS
                B3  92 lvvkvfrk 99 
                        +v +fr+
  TRIDC4AG053450.2 135 -KVYIFRA 141
                       .9*99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
LAGAKQRDYQ GLYANEVWKG ATDEEKATAS AKAEDLQRQI HQIRWPAFVK PITHACASRA  60
NFMTIPKQFT EYLPAHDEPV VVVDEADDES HMMYNASRQG RHCYLSKGWR EFAVDYDLEN  120
GDCLVFQLIE SAKFKVYIFR ATPDYESDQT SEDSEDEQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.14e-14B3 family protein