PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG053380.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 127aa    MW: 14962.4 Da    PI: 8.6493
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG053380.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.34.9e-1721114296
                       EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                       +  ++++ +++s ++ +pk+f+ e+        +   +l de   ++ + ++   ++k ++y+l kGW++F+ +++L +gD +vF++++r +f
  TRIDC4AG053380.4  21 VRPMSHECATRSILMQIPKHFI-EYlpA----HDEAAVLVDEADDEFHMMYNAhrKGKHCHYYLDKGWRRFAADHDLADGDCLVFHMTERVKF 108
                       566777777888999*******.66332....44579**************7744555555*************************9888888 PP

                       ..EEEE CS
                B3  91 elvvkv 96 
                       + ++++
  TRIDC4AG053380.4 109 KVRFSI 114
                       777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
AVAKAEELKR RIHRIRCPAF VRPMSHECAT RSILMQIPKH FIEYLPAHDE AAVLVDEADD  60
EFHMMYNAHR KGKHCHYYLD KGWRRFAADH DLADGDCLVF HMTERVKFKV RFSISSIPRI  120
KTPDFLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-09B3 family protein