PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG051580.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 823aa MW: 92656 Da PI: 6.3587

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG051580.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.4	1e-17	77	161	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA ++GF v+++ks+ + + g + + +vC+++g+ +e+ + r++ +t+C+a+++ +++ dg ++t+++l+HnH+l+p TRIDC4AG051580.6 77 NFYKRYALRTGFGVCVKKSSFT-KAGLCRRLLLVCNRWGNGKEDACY-----QARPTAKTNCQATVVARLWGDGMLHLTDVSLDHNHPLNP 161 6***************9998.6777************9999.....999*******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 823 aa Download sequence
AMADLIPGEG ELAFGGNQDD DDAEDASPGS KELAAMVEAA AAASVELDAA ADRAPPYGDD 60 RTPRDGMVFK SYEEVLNFYK RYALRTGFGV CVKKSSFTKA GLCRRLLLVC NRWGNGKEDA 120 CYQARPTAKT NCQATVVARL WGDGMLHLTD VSLDHNHPLN PSAARFLRCY KTLPSGMSKD 180 LVVRAARGEC ATSGGDVEAP PMFDDWGRLK IREGDVQAIN GFFAEMQAKQ PNFFYVMDFY 240 VEGHLRSVLW ADSRSREAYQ YFSDAIWVDT TCLRSKFNVP LVLFLGVNHH GQLVLLGCGL 300 LSDESTESFL WLFKAWLTCM KGRLPGAMIT DESVAIKAAV REVFPKTRHR ISDWHIVRSI 360 AEKLGELPEY ESIKVQMEAV IYGSLKDDQF ETRWKNLINR FSLQDNEWII FLYENRHLWV 420 PSFLKDAFWA GLSVNHRESP GAFFDGSVSH ETTLVSFLSN YMILVQYKHK MEQQDDFESL 480 TSGRVLVSKF PMEEQISKLY TLNMFVKFQD ELKSTLDCQV QQVSPSSFVV IDLAEQGTGL 540 VTRKYEVVHC METNRMECNC GLFQFSGIVC RHALSVLKWQ QVYDIPPCYV LNRWRSDFKQ 600 LHALDNPLKD PLVSSNHVER YDHISLQCLR LVEIGMVSDD KYQHALKLIS DMKRTLLDDN 660 LCRELEQKMS PPERAIVVNG DSHAQPGSSE GGPAKKRRGR PPKKSKEISA ESVSNQCGNK 720 ESLLVSSDVS QKGALHSSST ASNLGTHVRA HGVDDLMEEV NANEVSFESR YGVQSSHPNH 780 YGDQLHPSHT LQFGQHMPSA EQSRGVEWVY PTIYQVNGYF ASV

Sequence ? help Back to Top

Protein Sequence Length: 823 aa Download sequence

AMADLIPGEG ELAFGGNQDD DDAEDASPGS KELAAMVEAA AAASVELDAA ADRAPPYGDD  60
RTPRDGMVFK SYEEVLNFYK RYALRTGFGV CVKKSSFTKA GLCRRLLLVC NRWGNGKEDA  120
CYQARPTAKT NCQATVVARL WGDGMLHLTD VSLDHNHPLN PSAARFLRCY KTLPSGMSKD  180
LVVRAARGEC ATSGGDVEAP PMFDDWGRLK IREGDVQAIN GFFAEMQAKQ PNFFYVMDFY  240
VEGHLRSVLW ADSRSREAYQ YFSDAIWVDT TCLRSKFNVP LVLFLGVNHH GQLVLLGCGL  300
LSDESTESFL WLFKAWLTCM KGRLPGAMIT DESVAIKAAV REVFPKTRHR ISDWHIVRSI  360
AEKLGELPEY ESIKVQMEAV IYGSLKDDQF ETRWKNLINR FSLQDNEWII FLYENRHLWV  420
PSFLKDAFWA GLSVNHRESP GAFFDGSVSH ETTLVSFLSN YMILVQYKHK MEQQDDFESL  480
TSGRVLVSKF PMEEQISKLY TLNMFVKFQD ELKSTLDCQV QQVSPSSFVV IDLAEQGTGL  540
VTRKYEVVHC METNRMECNC GLFQFSGIVC RHALSVLKWQ QVYDIPPCYV LNRWRSDFKQ  600
LHALDNPLKD PLVSSNHVER YDHISLQCLR LVEIGMVSDD KYQHALKLIS DMKRTLLDDN  660
LCRELEQKMS PPERAIVVNG DSHAQPGSSE GGPAKKRRGR PPKKSKEISA ESVSNQCGNK  720
ESLLVSSDVS QKGALHSSST ASNLGTHVRA HGVDDLMEEV NANEVSFESR YGVQSSHPNH  780
YGDQLHPSHT LQFGQHMPSA EQSRGVEWVY PTIYQVNGYF ASV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-119	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG051580.6