PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG051580.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 758aa MW: 86320.1 Da PI: 7.1607

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG051580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.5	9e-18	9	93	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA ++GF v+++ks+ + + g + + +vC+++g+ +e+ + r++ +t+C+a+++ +++ dg ++t+++l+HnH+l+p TRIDC4AG051580.1 9 NFYKRYALRTGFGVCVKKSSFT-KAGLCRRLLLVCNRWGNGKEDACY-----QARPTAKTNCQATVVARLWGDGMLHLTDVSLDHNHPLNP 93 6***************9998.6777************9999.....999*******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 758 aa Download sequence
FKSYEEVLNF YKRYALRTGF GVCVKKSSFT KAGLCRRLLL VCNRWGNGKE DACYQARPTA 60 KTNCQATVVA RLWGDGMLHL TDVSLDHNHP LNPSAARFLR CYKTLPSGMS KDLVVRAARG 120 ECATSGGDVE APPMFDDWGR LKIREGDVQA INGFFAEMQA KQPNFFYVMD FYVEGHLRSV 180 LWADSRSREA YQYFSDAIWV DTTCLRSKFN VPLVLFLGVN HHGQLVLLGC GLLSDESTES 240 FLWLFKAWLT CMKGRLPGAM ITDESVAIKA AVREVFPKTR HRISDWHIVR SIAEKLGELP 300 EYESIKVQME AVIYGSLKDD QFETRWKNLI NRFSLQDNEW IIFLYENRHL WVPSFLKDAF 360 WAGLSVNHRE SPGAFFDGSV SHETTLVSFL SNYMILVQYK HKMEQQDDFE SLTSGRVLVS 420 KFPMEEQISK LYTLNMFVKF QDELKSTLDC QVQQVSPSSF VVIDLAEQGT GLVTRKYEVV 480 HCMETNRMEC NCGLFQFSGI VCRHALSVLK WQQVYDIPPC YVLNRWRSDF KQLHALDNPL 540 KDPLVSSNHV ERYDHISLQC LRLVEIGMVS DDKYQHALKL ISDMKRTLLD DNLCRELEQK 600 MSPPERAIVV NGDSHAQPGS SEGGPAKKRR GRPPKKSKEI SAESVSNQCG NKESLLVSSD 660 VSQKGALHSS STASNLGTHV RAHGVDDLME EVNANEVSFE SRYGVQSSHP NHYGDQLHPS 720 HTLQFGQHMP SAEQSRGVEW VYPTIYQDDQ VPYDRRTS

Sequence ? help Back to Top

Protein Sequence Length: 758 aa Download sequence

FKSYEEVLNF YKRYALRTGF GVCVKKSSFT KAGLCRRLLL VCNRWGNGKE DACYQARPTA  60
KTNCQATVVA RLWGDGMLHL TDVSLDHNHP LNPSAARFLR CYKTLPSGMS KDLVVRAARG  120
ECATSGGDVE APPMFDDWGR LKIREGDVQA INGFFAEMQA KQPNFFYVMD FYVEGHLRSV  180
LWADSRSREA YQYFSDAIWV DTTCLRSKFN VPLVLFLGVN HHGQLVLLGC GLLSDESTES  240
FLWLFKAWLT CMKGRLPGAM ITDESVAIKA AVREVFPKTR HRISDWHIVR SIAEKLGELP  300
EYESIKVQME AVIYGSLKDD QFETRWKNLI NRFSLQDNEW IIFLYENRHL WVPSFLKDAF  360
WAGLSVNHRE SPGAFFDGSV SHETTLVSFL SNYMILVQYK HKMEQQDDFE SLTSGRVLVS  420
KFPMEEQISK LYTLNMFVKF QDELKSTLDC QVQQVSPSSF VVIDLAEQGT GLVTRKYEVV  480
HCMETNRMEC NCGLFQFSGI VCRHALSVLK WQQVYDIPPC YVLNRWRSDF KQLHALDNPL  540
KDPLVSSNHV ERYDHISLQC LRLVEIGMVS DDKYQHALKL ISDMKRTLLD DNLCRELEQK  600
MSPPERAIVV NGDSHAQPGS SEGGPAKKRR GRPPKKSKEI SAESVSNQCG NKESLLVSSD  660
VSQKGALHSS STASNLGTHV RAHGVDDLME EVNANEVSFE SRYGVQSSHP NHYGDQLHPS  720
HTLQFGQHMP SAEQSRGVEW VYPTIYQDDQ VPYDRRTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-117	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG051580.1