PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG050170.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1280aa MW: 142862 Da PI: 7.3557

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG050170.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	136.2	1.1e-42	1048	1159	3	116
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenpt 93 k + wlk++e++ iLen+e++ + ++++++p sgsl+L nr+ r+frkDG++w+k k+g E+h++LKvg+v++l+cyYa +++np TRIDC4AG050170.1 1048 KAMSCWLKPSEVLYILENYERFWIPSKTPNKPASGSLFLQNRRLNRFFRKDGHEWRKNKNGG--LEAHKRLKVGNVDALSCYYAYGRKNPY 1136 34788*****************************************************96..6********************** PP CG-1 94 fqrrcywlLeeelekivlvhyle 116 fqrrcyw+Le ++++ivlvhy++ TRIDC4AG050170.1 1137 FQRRCYWMLEPAYDHIVLVHYMS 1159 *******************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 1280 aa Download sequence
DSNNPSHAHP PPHLATVDRR RSLFPPPPTA EHRLPRTSES VLAGEHYRRE ERSMEAPVCA 60 LVDAMSKLPA KLHGLLRRHG HMLPRGAEDE IPLIIQDLDK IMAILQDHDR PTVEDGTMMI 120 GCLMKEAREL SYDIDDCIDQ YEQAAAAAAA AAAGSRSISA RIPRRRNSRR GSKTTRLPEK 180 LKRRLWMANK IREFSVRSQE ALGRYSLFSR DGVGAAASRC DTSFGFWHLR GEHANHLVGI 240 DGPMNTLEVW LAKGGEQKLK FVSIVGSGGV GKTTLASEVY HRIGGQFECH AFVQSSQKPD 300 IRRLLISFLS QIQPNQPPSN WKVHSLIAHI RAHLQDKRYL IVVDDVWATT TWDIVNYALP 360 DGNCNSRILI TTEIEDVALK CCGYDPSYVF KMKPLGEDDS RKIFLSAVVA PPESIEISNS 420 IIRKCGGLPL ATVTIASLLA SQMGKPEQWN YVDKFLSYGL RTNPTLQGMQ QVLNLSYNNL 480 PPHLKACLLY LSIYQEGHVI WKDDLAKQWI AEGFIRATEG KDEEEMSGAY FDELISSRMI 540 QPIYTSDTCE ILSCTVHYMV VDFVKHKSNE ENFVTAIDHS QTSRTLSDKV RRLSLHFGNA 600 EDAAPPTNMR LSQVRTLAFF GVISCLPSMI EFRLLQVLIL QFWGDDESIS LDLTTILELF 660 RLRYLQVTCN VNLEVQATKV QGLKFLETLK IDARASTVPE DITHLPHLLH LILPADTNLP 720 NGIGHMTSLR TLGYFDIGTN SMETLQRLGK LTNLQDLQLT IHTLPSENLK NNMLCLGSIL 780 CKLSNLKSLT LAPVGVGSSC INCQNVAVGE RMIISGDDLS NVSSPQALLQ RLKLSSRVCI 840 FSSLPKWVGH LCKLSILKIG VSELTGNDVE VLRGLPALTA LSLYVCTKLA EQIVFNKAGF 900 SVIRYFKFQC SVPWLKFEAG AMPNLRKLKL GFNSSGVDQH GTAAIIIEQL SGLEDISAEI 960 GGAGIDWESV LANTIRNHPS NPRINIQLKD CTFYGHTSMG TKQKGHMNKN DNSGEDEKKQ 1020 ADSGVFTLSE SSSRLHISGF DMEVLLKKAM SCWLKPSEVL YILENYERFW IPSKTPNKPA 1080 SGSLFLQNRR LNRFFRKDGH EWRKNKNGGL EAHKRLKVGN VDALSCYYAY GRKNPYFQRR 1140 CYWMLEPAYD HIVLVHYMSI AEGNSNLSCV TEVSSSLQTC GVTETGQSYS NLSSVTEVSS 1200 RSASKESNYN VGMLDYNIGI PDCNIVMPEA QERGQSSVEH TNEARPKDDR GLTEALEAIA 1260 NHLLGDDDNG HIYNSDQSQE

Sequence ? help Back to Top

Protein Sequence Length: 1280 aa Download sequence

DSNNPSHAHP PPHLATVDRR RSLFPPPPTA EHRLPRTSES VLAGEHYRRE ERSMEAPVCA  60
LVDAMSKLPA KLHGLLRRHG HMLPRGAEDE IPLIIQDLDK IMAILQDHDR PTVEDGTMMI  120
GCLMKEAREL SYDIDDCIDQ YEQAAAAAAA AAAGSRSISA RIPRRRNSRR GSKTTRLPEK  180
LKRRLWMANK IREFSVRSQE ALGRYSLFSR DGVGAAASRC DTSFGFWHLR GEHANHLVGI  240
DGPMNTLEVW LAKGGEQKLK FVSIVGSGGV GKTTLASEVY HRIGGQFECH AFVQSSQKPD  300
IRRLLISFLS QIQPNQPPSN WKVHSLIAHI RAHLQDKRYL IVVDDVWATT TWDIVNYALP  360
DGNCNSRILI TTEIEDVALK CCGYDPSYVF KMKPLGEDDS RKIFLSAVVA PPESIEISNS  420
IIRKCGGLPL ATVTIASLLA SQMGKPEQWN YVDKFLSYGL RTNPTLQGMQ QVLNLSYNNL  480
PPHLKACLLY LSIYQEGHVI WKDDLAKQWI AEGFIRATEG KDEEEMSGAY FDELISSRMI  540
QPIYTSDTCE ILSCTVHYMV VDFVKHKSNE ENFVTAIDHS QTSRTLSDKV RRLSLHFGNA  600
EDAAPPTNMR LSQVRTLAFF GVISCLPSMI EFRLLQVLIL QFWGDDESIS LDLTTILELF  660
RLRYLQVTCN VNLEVQATKV QGLKFLETLK IDARASTVPE DITHLPHLLH LILPADTNLP  720
NGIGHMTSLR TLGYFDIGTN SMETLQRLGK LTNLQDLQLT IHTLPSENLK NNMLCLGSIL  780
CKLSNLKSLT LAPVGVGSSC INCQNVAVGE RMIISGDDLS NVSSPQALLQ RLKLSSRVCI  840
FSSLPKWVGH LCKLSILKIG VSELTGNDVE VLRGLPALTA LSLYVCTKLA EQIVFNKAGF  900
SVIRYFKFQC SVPWLKFEAG AMPNLRKLKL GFNSSGVDQH GTAAIIIEQL SGLEDISAEI  960
GGAGIDWESV LANTIRNHPS NPRINIQLKD CTFYGHTSMG TKQKGHMNKN DNSGEDEKKQ  1020
ADSGVFTLSE SSSRLHISGF DMEVLLKKAM SCWLKPSEVL YILENYERFW IPSKTPNKPA  1080
SGSLFLQNRR LNRFFRKDGH EWRKNKNGGL EAHKRLKVGN VDALSCYYAY GRKNPYFQRR  1140
CYWMLEPAYD HIVLVHYMSI AEGNSNLSCV TEVSSSLQTC GVTETGQSYS NLSSVTEVSS  1200
RSASKESNYN VGMLDYNIGI PDCNIVMPEA QERGQSSVEH TNEARPKDDR GLTEALEAIA  1260
NHLLGDDDNG HIYNSDQSQE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	169	185	RRGSKTTRLPEKLKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.1	4e-34	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG050170.1