PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG044870.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 399aa MW: 44336.5 Da PI: 9.1985

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG044870.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	73.7	2e-23	127	171	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++ +k+CErH++r+r+rsrk++e+ TRIDC4AG044870.8 127 DPEPGRCRRTDGKKWRCSKEAMAEHKYCERHINRNRHRSRKPVEN 171 79****************************************997 PP
2	QLQ	54.8	2.8e-19	68	103	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT++Q+++L++Q+l+yKyL+a++P+P+ Ll i+k TRIDC4AG044870.8 68 PFTPSQWMELEHQALIYKYLNAKAPIPSGLLISISK 103 8*****************************999975 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
TPPATKDARS GGGFTQAAAC PYPYPSPFLD EQKMLSFSKA AAAHQPPSGM DFGRSNEQRL 60 LLARSKMPFT PSQWMELEHQ ALIYKYLNAK APIPSGLLIS ISKSFRPSSD RMPWRPVYQG 120 FTNADSDPEP GRCRRTDGKK WRCSKEAMAE HKYCERHINR NRHRSRKPVE NQTRKNAKET 180 PAAGSISAAV SQGGCKKAKA GDELKPGSVS YWTDNLNRAM VSKARGNNPE EGNSAPLLNS 240 TNQQHTLSLF SQLKQQSKPD KFSPAVDSES ISSNTVLKPW ERSNQQSSKD VSSTTLHDRG 300 CLQSVLQDFS MHKNDKIESQ KNNASVPSTF YSSTEGRHIS CLASNMMQVQ EDCISSSWEI 360 PQGGPLGEIL TNSKNTDDLT NKCESRSYGW LLSLDEHEM

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

TPPATKDARS GGGFTQAAAC PYPYPSPFLD EQKMLSFSKA AAAHQPPSGM DFGRSNEQRL  60
LLARSKMPFT PSQWMELEHQ ALIYKYLNAK APIPSGLLIS ISKSFRPSSD RMPWRPVYQG  120
FTNADSDPEP GRCRRTDGKK WRCSKEAMAE HKYCERHINR NRHRSRKPVE NQTRKNAKET  180
PAAGSISAAV SQGGCKKAKA GDELKPGSVS YWTDNLNRAM VSKARGNNPE EGNSAPLLNS  240
TNQQHTLSLF SQLKQQSKPD KFSPAVDSES ISSNTVLKPW ERSNQQSSKD VSSTTLHDRG  300
CLQSVLQDFS MHKNDKIESQ KNNASVPSTF YSSTEGRHIS CLASNMMQVQ EDCISSSWEI  360
PQGGPLGEIL TNSKNTDDLT NKCESRSYGW LLSLDEHEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	4e-45	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG044870.8