PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG044870.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 433aa MW: 48534.8 Da PI: 9.3617

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG044870.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	73.5	2.3e-23	161	205	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++ +k+CErH++r+r+rsrk++e+ TRIDC4AG044870.6 161 DPEPGRCRRTDGKKWRCSKEAMAEHKYCERHINRNRHRSRKPVEN 205 79****************************************997 PP
2	QLQ	54.7	3.1e-19	102	137	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT++Q+++L++Q+l+yKyL+a++P+P+ Ll i+k TRIDC4AG044870.6 102 PFTPSQWMELEHQALIYKYLNAKAPIPSGLLISISK 137 8*****************************999975 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MAMGIRSNLP IHWGPSCSAK AAPFHCFFLL LYLSTLLSSL GACNNKKQIN KHIHGYLQDK 60 AVASLSIFAH AEWGFLFFFL HLGMDFGRSN EQRLLLARSK MPFTPSQWME LEHQALIYKY 120 LNAKAPIPSG LLISISKSFR PSSDRMPWRP VYQGFTNADS DPEPGRCRRT DGKKWRCSKE 180 AMAEHKYCER HINRNRHRSR KPVENQTRKN AKETPAAGSI SAAVSQGGCK KAKAGDELKP 240 GSVSYWTDNL NRAMVSKARG NNPEEGNSAP LLNSTNQQHT LSLFSQLKQQ SKPDKFSPAV 300 DSESISSNTV LKPWERSNQQ SSKDVSSTTL HDRGCLQSVL QDFSMHKNDK IESQKNNASV 360 PSTFYSSTEG RHISCLASNM MQVQEDCISS SWEIPQGGPL GEILTNSKNT DDLTNKCESR 420 SYGWLLSLDE HEM

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MAMGIRSNLP IHWGPSCSAK AAPFHCFFLL LYLSTLLSSL GACNNKKQIN KHIHGYLQDK  60
AVASLSIFAH AEWGFLFFFL HLGMDFGRSN EQRLLLARSK MPFTPSQWME LEHQALIYKY  120
LNAKAPIPSG LLISISKSFR PSSDRMPWRP VYQGFTNADS DPEPGRCRRT DGKKWRCSKE  180
AMAEHKYCER HINRNRHRSR KPVENQTRKN AKETPAAGSI SAAVSQGGCK KAKAGDELKP  240
GSVSYWTDNL NRAMVSKARG NNPEEGNSAP LLNSTNQQHT LSLFSQLKQQ SKPDKFSPAV  300
DSESISSNTV LKPWERSNQQ SSKDVSSTTL HDRGCLQSVL QDFSMHKNDK IESQKNNASV  360
PSTFYSSTEG RHISCLASNM MQVQEDCISS SWEIPQGGPL GEILTNSKNT DDLTNKCESR  420
SYGWLLSLDE HEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	1e-44	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG044870.6