PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4AG044870.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | GRF | ||||||||
Protein Properties | Length: 258aa MW: 29250.6 Da PI: 10.3228 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 74.6 | 1.1e-23 | 161 | 205 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++ +k+CErH++r+r+rsrk++e+ TRIDC4AG044870.4 161 DPEPGRCRRTDGKKWRCSKEAMAEHKYCERHINRNRHRSRKPVEN 205 79****************************************997 PP | |||||||
2 | QLQ | 55.7 | 1.5e-19 | 102 | 137 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT++Q+++L++Q+l+yKyL+a++P+P+ Ll i+k TRIDC4AG044870.4 102 PFTPSQWMELEHQALIYKYLNAKAPIPSGLLISISK 137 8*****************************999975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 258 aa Download sequence |
MAMGIRSNLP IHWGPSCSAK AAPFHCFFLL LYLSTLLSSL GACNNKKQIN KHIHGYLQDK 60 AVASLSIFAH AEWGFLFFFL HLGMDFGRSN EQRLLLARSK MPFTPSQWME LEHQALIYKY 120 LNAKAPIPSG LLISISKSFR PSSDRMPWRP VYQGFTNADS DPEPGRCRRT DGKKWRCSKE 180 AMAEHKYCER HINRNRHRSR KPVENQTRKN AKETPAAGSI SAAVSQGGCK KAKAGDELKP 240 GSVSYWTDNL NRFVYIES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G37740.1 | 2e-45 | GRF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4AG044870.4 |