PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG044870.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 381aa MW: 42358.2 Da PI: 8.886

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG044870.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	73.8	1.9e-23	109	153	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++ +k+CErH++r+r+rsrk++e+ TRIDC4AG044870.11 109 DPEPGRCRRTDGKKWRCSKEAMAEHKYCERHINRNRHRSRKPVEN 153 79****************************************997 PP
2	QLQ	54.9	2.6e-19	50	85	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT++Q+++L++Q+l+yKyL+a++P+P+ Ll i+k TRIDC4AG044870.11 50 PFTPSQWMELEHQALIYKYLNAKAPIPSGLLISISK 85 8*****************************999975 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
LSLSSATSSI HGHGDSLEPT HSLGALLLSQ GMDFGRSNEQ RLLLARSKMP FTPSQWMELE 60 HQALIYKYLN AKAPIPSGLL ISISKSFRPS SDRMPWRPVY QGFTNADSDP EPGRCRRTDG 120 KKWRCSKEAM AEHKYCERHI NRNRHRSRKP VENQTRKNAK ETPAAGSISA AVSQGGCKKA 180 KAGDELKPGS VSYWTDNLNR AMVSKARGNN PEEGNSAPLL NSTNQQHTLS LFSQLKQQSK 240 PDKFSPAVDS ESISSNTVLK PWERSNQQSS KDVSSTTLHD RGCLQSVLQD FSMHKNDKIE 300 SQKNNASVPS TFYSSTEGRH ISCLASNMMQ VQEDCISSSW EIPQGGPLGE ILTNSKNTDD 360 LTNKCESRSY GWLLSLDEHE M

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

LSLSSATSSI HGHGDSLEPT HSLGALLLSQ GMDFGRSNEQ RLLLARSKMP FTPSQWMELE  60
HQALIYKYLN AKAPIPSGLL ISISKSFRPS SDRMPWRPVY QGFTNADSDP EPGRCRRTDG  120
KKWRCSKEAM AEHKYCERHI NRNRHRSRKP VENQTRKNAK ETPAAGSISA AVSQGGCKKA  180
KAGDELKPGS VSYWTDNLNR AMVSKARGNN PEEGNSAPLL NSTNQQHTLS LFSQLKQQSK  240
PDKFSPAVDS ESISSNTVLK PWERSNQQSS KDVSSTTLHD RGCLQSVLQD FSMHKNDKIE  300
SQKNNASVPS TFYSSTEGRH ISCLASNMMQ VQEDCISSSW EIPQGGPLGE ILTNSKNTDD  360
LTNKCESRSY GWLLSLDEHE M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	1e-45	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG044870.11