PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG043800.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 561aa MW: 63180 Da PI: 6.8812

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG043800.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	34	5.2e-11	195	279	9	97
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +lk + + lp k +e+++++ +++ t++le ++ + v+ +k+++ +vl+ GW++ v+an+++e+D +vF +g +++l v+++ TRIDC4AG043800.2 195 VNLKDCSVNLPLKLVEHFKED-TSKATIQLEAPNDMIYGVEA--CKHGDDqIVLQYGWNNLVDANRIQENDLLVFITKG--TKRLEVRIL 279 45678999*****777666.5678************..5555545***********************665..444577776 PP
2	B3	43.1	7.7e-14	461	557	3	99
EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS B3 3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 v ++++ + ++l + ++ ++h ++++l+l+ e g + + +l ++++++r ++++GW++Fv +n+++egD+++F++ ++ ++ ++ TRIDC4AG043800.2 461 VVVMTKSRINADQLGFRMEYGARHipH--LGRKMDLMLQAEGGTEQRTRLVIDQNGKR-WIRRGWQQFVTENKVREGDICLFERGEStKKLRM 550 455677777778899999998899652..347799*************99888877.79********************8877799999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v ++rk TRIDC4AG043800.2 551 TVYFIRK 557 9999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MWWRHYPRNH VGDDKTQFVA VATGGFRRSM CIPWEVANHL GSMISETIKL EAPNGIFLIG 60 VCRKTGELVL RAGWDKFVAM HHIKENYSFW FVYRGNSTFK VHIFNSNGHE KATSCSKPPS 120 ESFGGVPPAA TCDHHVLNEQ VPSVSGNVQT STDSGYSMLP GCHLTKAQDE KVRELACTMR 180 SQVPLYVAVM NKSNVNLKDC SVNLPLKLVE HFKEDTSKAT IQLEAPNDMI YGVEACKHGD 240 DQIVLQYGWN NLVDANRIQE NDLLVFITKG TKRLEVRILG TSVHQRTSSC FDVGNISSTQ 300 EIREDSLEIT DPPPHTDYYV SSSDDDHIME EGYYVSSSDD DHIAEEDYVS SSDADHIVEE 360 GTRKSGRRQK QAPSRYAKAQ KVASTSSPSA AKSGYEAHKL NERASVEFGI NLEPHSSTSN 420 LEGPSQYPYV LSEGRTSLSS VEKEKVEEKV QAIQSELPIF VVVMTKSRIN ADQLGFRMEY 480 GARHIPHLGR KMDLMLQAEG GTEQRTRLVI DQNGKRWIRR GWQQFVTENK VREGDICLFE 540 RGESTKKLRM TVYFIRKSSQ T

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MWWRHYPRNH VGDDKTQFVA VATGGFRRSM CIPWEVANHL GSMISETIKL EAPNGIFLIG  60
VCRKTGELVL RAGWDKFVAM HHIKENYSFW FVYRGNSTFK VHIFNSNGHE KATSCSKPPS  120
ESFGGVPPAA TCDHHVLNEQ VPSVSGNVQT STDSGYSMLP GCHLTKAQDE KVRELACTMR  180
SQVPLYVAVM NKSNVNLKDC SVNLPLKLVE HFKEDTSKAT IQLEAPNDMI YGVEACKHGD  240
DQIVLQYGWN NLVDANRIQE NDLLVFITKG TKRLEVRILG TSVHQRTSSC FDVGNISSTQ  300
EIREDSLEIT DPPPHTDYYV SSSDDDHIME EGYYVSSSDD DHIAEEDYVS SSDADHIVEE  360
GTRKSGRRQK QAPSRYAKAQ KVASTSSPSA AKSGYEAHKL NERASVEFGI NLEPHSSTSN  420
LEGPSQYPYV LSEGRTSLSS VEKEKVEEKV QAIQSELPIF VVVMTKSRIN ADQLGFRMEY  480
GARHIPHLGR KMDLMLQAEG GTEQRTRLVI DQNGKRWIRR GWQQFVTENK VREGDICLFE  540
RGESTKKLRM TVYFIRKSSQ T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	1e-10	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG043800.2