PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG042210.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GRAS | ||||||||
Protein Properties | Length: 620aa MW: 65185.2 Da PI: 4.7485 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 463.9 | 9.3e-142 | 232 | 616 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl...fsevsPi 90 lv++Ll+cAeav+++++++a+al++++ la+++g +m+++aayf eALa+r++r ++p+++s + ++++a+ l f+e +P+ TRIDC4AG042210.2 232 LVHALLACAEAVQQENFSAAEALVKQIPLLAASQGGAMRKVAAYFGEALARRVFR--------FRPQPDS--SLLDAAFADLLhahFYESCPY 314 689****************************************************........5555555..34444444444456******* PP GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183 lkf+h+taNqaIlea++g++rvH++Df+i+qG+QWpaLlqaLa Rp+gpps+R+Tgvg+p+++++++l+++g++La+fA++++v+f+++ lva TRIDC4AG042210.2 315 LKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVA 407 ********************************************************************************************* PP GRAS 184 krledleleeLrvkp.......gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269 +l+dle+ +L+ + E++aVn+v+++hrll+++++le+ vL +v+ ++P++v+vveqea+hns++Fl+rf+e+l+yys++fd TRIDC4AG042210.2 408 ATLADLEPFMLQPEGeedpneePEVIAVNSVFEMHRLLAQPGALEK----VLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFD 496 ***********544444557789***********************....******************************************* PP GRAS 270 sleak..............lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sd 347 sle + +p+++ +++++++++lgr+i+nvvacegaer+erhetl++Wr+rl++aGF++v+l+++a+kqa++ll+ ++ +d TRIDC4AG042210.2 497 SLEGGssggpsevssgaaaAPAAAGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAgGD 589 **98889**********9999999********************************************************************* PP GRAS 348 gyrveeesgslvlgWkdrpLvsvSaWr 374 gy+vee++g+l+lgW++rpL+++SaWr TRIDC4AG042210.2 590 GYKVEEKEGCLTLGWHTRPLIATSAWR 616 **************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 620 aa Download sequence |
MKREYQDAGG SGGGGGMGSS EDKMMVSAAA GEGEEVDELL AALGYKVRAS DMADVAQKLE 60 QLEMAMGMGG VGAGAAPDDS FATHLATDTV HYNPTDLSSW VESMLSELNA PPPPLPPAPQ 120 QLNASTSSTV TGGGYFDLPP SVDSSCSTYA LRPIPSPAGA VGPADLSADS VRDPKRMRTG 180 GSSTSSSSSS SSSLGGGARS SVVEAAPPVA AGANAPALPV VVVDTQEAGI RLVHALLACA 240 EAVQQENFSA AEALVKQIPL LAASQGGAMR KVAAYFGEAL ARRVFRFRPQ PDSSLLDAAF 300 ADLLHAHFYE SCPYLKFAHF TANQAILEAF AGCRRVHVVD FGIKQGMQWP ALLQALALRP 360 GGPPSFRLTG VGPPQPDETD ALQQVGWKLA QFAHTIRVDF QYRGLVAATL ADLEPFMLQP 420 EGEEDPNEEP EVIAVNSVFE MHRLLAQPGA LEKVLGTVRA VRPRIVTVVE QEANHNSGTF 480 LDRFTESLHY YSTMFDSLEG GSSGGPSEVS SGAAAAPAAA GTDQVMSEVY LGRQICNVVA 540 CEGAERTERH ETLGQWRNRL GNAGFETVHL GSNAYKQAST LLALFAGGDG YKVEEKEGCL 600 TLGWHTRPLI ATSAWRLAAP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 0.0 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG042210.2 |