PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG042060.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GeBP
Protein Properties Length: 328aa    MW: 35123.7 Da    PI: 4.9644
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG042060.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57383.62.8e-26195297
            DUF573  2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96
                      +fqr+wse+De+ +LqGl+ +   +g     d++ fy+ +++s+   +++sql+eK+rrLK+K ++ ++++++g +p+  ++hd+++++l++++W
  TRIDC4AG042060.4  1 KFQRIWSESDELRFLQGLLGC-GAQGLVFPRDLNVFYDRFSESMPQPYTRSQLSEKLRRLKNKHRNVSSRVARGLDPARLAPHDRDVLHLCSRLW 94
                      69*******************.556878888**************************************************************** PP

            DUF573 97 g 97
                      +
  TRIDC4AG042060.4 95 D 95
                      8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
KFQRIWSESD ELRFLQGLLG CGAQGLVFPR DLNVFYDRFS ESMPQPYTRS QLSEKLRRLK  60
NKHRNVSSRV ARGLDPARLA PHDRDVLHLC SRLWDPANAA TSPFAAAAAP AGSSGNKRRR  120
SNPAVVPLDV PAPSGDSNSH GYNGISSSAP GAAFPDDNGA EDVMYLEQES GHHLYFDEGA  180
AFVADGNLDG ITLDGIALDQ AETMAVLTDV GDNGVVAGDD GVVGNDAAPQ NAVNNGGNPQ  240
NAMNNGGTGQ NGNCNVLLPR SSEHRMASAV LDVFEECLRE AKADGIVNGG NAQESELARR  300
WRAQRIDELD VLSRRLRLII EDATAAGH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.22e-12GeBP family protein