PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG040730.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 567aa    MW: 61174.3 Da    PI: 4.8265
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG040730.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS346.25.3e-1061985673374
              GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                       + Ll+c +a ++ +  la a La+++  a+++gdp +R+a+yf  ALa+rla    + +++l + ++++  s+e++  +k++++++P+ kf+h
  TRIDC4AG040730.3 198 QSLLACSRAAAA-SPGLAAAELAKVRAAATESGDPAERVAFYFSDALARRLAC---GGAAQLDTASDARLASDEVTLCYKTLNDACPYSKFAH 286
                       789999998777.67889999*******************************9...5555566666666679********************* PP

              GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       ltaNqaIlea+  ++++Hi+Df+i qG+QW+aLlqaLa+Rpeg+p ++Ri gv sp  g   + +l +t  rL++fA+ lgv+fef + + + 
  TRIDC4AG040730.3 287 LTANQAILEATGAATKIHIVDFGIVQGIQWAALLQALATRPEGKPsRIRISGVPSPYLGphPAASLAATSARLRDFAQLLGVDFEFVP-LLRP 378
                       *****************************************887769********99888899*************************.599* PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +++l+ ++++v+p+E++aVn++lql++ll   ++++++ +++L+l ksl P vv++ e e+++n++ F++rf++al+yy a+f+sl++ ++r+
  TRIDC4AG040730.3 379 VHELDRSDFSVDPDEVVAVNFMLQLYHLL---GDSDEPVRRLLRLAKSLGPAVVTLGEYEVSLNRAGFVDRFASALSYYRAVFESLDVAMARD 468
                       *****************************...66666777***************************************************** PP

              GRAS 279 seerikvErellgreivnvva.cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLv 368
                       se+r+++Er ++g++i+ +v   ega+r+ r+   ++W++ +e +GF+pv+ls++a++qa+lll  ++ +  y++ +   +++ l W++rpL+
  TRIDC4AG040730.3 469 SEDRATLERSMFGERIRRAVGpPEGADRTDRMAGSAEWQALMEWCGFQPVRLSNYAESQAELLLWDYDaKYKYSLVQLPPAFLsLAWEKRPLL 561
                       ********************83699*******************************************8888999999998888********* PP

              GRAS 369 svSaWr 374
                       +vSaWr
  TRIDC4AG040730.3 562 TVSAWR 567
                       *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    
XXXXXXXXXX XXXXXXXXXX XXXAYMCADS GNLMAIAQQV IQQQQQHNQQ QQRHHHHHHH  60
LAPPPMPMPP APAPPHAQIP GSLPFGAAGS AAWPQGENFF SDVFGASAAD AVFSDLAAGA  120
DFDSDVWMES LIGDAPVFQD SDLDRLIFTT PPPAEAEAEA VARDENAPAA LPPVAATAQA  180
ACSSPGSADA SCSAPILQSL LACSRAAAAS PGLAAAELAK VRAAATESGD PAERVAFYFS  240
DALARRLACG GAAQLDTASD ARLASDEVTL CYKTLNDACP YSKFAHLTAN QAILEATGAA  300
TKIHIVDFGI VQGIQWAALL QALATRPEGK PSRIRISGVP SPYLGPHPAA SLAATSARLR  360
DFAQLLGVDF EFVPLLRPVH ELDRSDFSVD PDEVVAVNFM LQLYHLLGDS DEPVRRLLRL  420
AKSLGPAVVT LGEYEVSLNR AGFVDRFASA LSYYRAVFES LDVAMARDSE DRATLERSMF  480
GERIRRAVGP PEGADRTDRM AGSAEWQALM EWCGFQPVRL SNYAESQAEL LLWDYDAKYK  540
YSLVQLPPAF LSLAWEKRPL LTVSAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-126GRAS family protein