PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG040020.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 226aa    MW: 25271.6 Da    PI: 6.8877
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG040020.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67e-1157105355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC4AG040020.12  57 NSHSLAERLRRKKISERMKLLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 105
                        58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
NVGDQQTEVS SQPERNSVER DNRKISPKTQ SKEDSSDGDG TKENYVHFRA KRGQATNSHS  60
LAERLRRKKI SERMKLLQDL VPGCNKITGK AVMLDEIINY VQSLQRQVEF LSMKLATVNP  120
ELGFDIEQIL SKQMMLSQDR RLGFYGADPG SSALIAHFNQ GMMHPDMICN ASNPAGALHG  180
TIHDISMMNQ MPEMWETLQN IPHMNFNPAV AADSSTNNAG PMKIEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-56bHLH family protein