PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG039920.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 468aa MW: 50395.1 Da PI: 7.7051

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG039920.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.2	6.8e-24	73	116	2	45
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e TRIDC4AG039920.3 73 LEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKHVEG 116 69***************************************986 PP
2	QLQ	59.3	1.1e-20	6	42	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKyLaan vP+ Ll++i++ TRIDC4AG039920.3 6 GPFTPSQWMELEHQALIYKYLAANIAVPHSLLVPIRR 42 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MARVRGPFTP SQWMELEHQA LIYKYLAANI AVPHSLLVPI RRSVTSLYPS AYFGSSTLGW 60 GPFQLGYSGS ADLEPGRCRR TDGKKWRCSR DAVADQKYCE RHMNRGRHRS RKHVEGQPGH 120 AAKAMPATVA AAAAQPGALA TGGGGGATAG AAICHEQQPL KSYSASTIDP CSLQYNREMA 180 SKQQHECEQV QDSDTLSMLT SMSARNTNTG SMFPFSKEHH NHNPFEVRSS RPDYGLVSSD 240 SLMSSPHSSL ENVNLLTSQR ALSSEQQSSL SLQHFADWPR TPSQQGQGGG GLSWPDAENM 300 QLAHQRTQQL SVSAAPMASS DLSSASTSPI HEKLMLSPLK LSREYSPIGL SVAATAAAAA 360 KDEGEANWMP MFRDSSMGGP LGEALNKNNG GNMEAKNYLS ASLNLMTDAW DSSPLESSPV 420 GVLQRTAFGS VSSSTGSSPR QEYHGVYDGN PRDDLGSIVV NHPSIRLM

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MARVRGPFTP SQWMELEHQA LIYKYLAANI AVPHSLLVPI RRSVTSLYPS AYFGSSTLGW  60
GPFQLGYSGS ADLEPGRCRR TDGKKWRCSR DAVADQKYCE RHMNRGRHRS RKHVEGQPGH  120
AAKAMPATVA AAAAQPGALA TGGGGGATAG AAICHEQQPL KSYSASTIDP CSLQYNREMA  180
SKQQHECEQV QDSDTLSMLT SMSARNTNTG SMFPFSKEHH NHNPFEVRSS RPDYGLVSSD  240
SLMSSPHSSL ENVNLLTSQR ALSSEQQSSL SLQHFADWPR TPSQQGQGGG GLSWPDAENM  300
QLAHQRTQQL SVSAAPMASS DLSSASTSPI HEKLMLSPLK LSREYSPIGL SVAATAAAAA  360
KDEGEANWMP MFRDSSMGGP LGEALNKNNG GNMEAKNYLS ASLNLMTDAW DSSPLESSPV  420
GVLQRTAFGS VSSSTGSSPR QEYHGVYDGN PRDDLGSIVV NHPSIRLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	1e-47	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG039920.3